Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 RNU4-31P-201ENST00000384211 141 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 MIR137-201ENST00000385223 102 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 Y_RNA.578-201ENST00000390903 88 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 DNAJC19P6-201ENST00000401853 280 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 PPIAP9-201ENST00000403866 498 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC092638.1-201ENST00000411966 1275 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 EI24P4-201ENST00000423683 1078 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 NIPA2P1-201ENST00000426223 976 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AL360081.1-201ENST00000428299 555 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 TXNL1P1-201ENST00000429528 554 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC093716.1-201ENST00000435923 377 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC023050.1-201ENST00000498198 304 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC117522.2-201ENST00000510049 657 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC008033.2-201ENST00000542626 177 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC127024.5-201ENST00000580085 462 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AL162431.4-201ENST00000604674 411 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC012557.1-201ENST00000607115 611 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AL121890.3-201ENST00000618494 516 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC010975.3-201ENST00000618727 978 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SSX2IPQ9Y2D8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AC006206.1-201ENST00000544842 3387 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 RNU6-224P-201ENST00000384055 107 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 RNA5SP87-201ENST00000384155 118 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 SNORD116-8-201ENST00000384365 95 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 RPS4XP9-201ENST00000405151 780 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 RN7SKP247-201ENST00000411094 308 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AC124944.2-201ENST00000429866 1242 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 NDUFB4P8-201ENST00000435351 367 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 OR51B8P-201ENST00000449892 769 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 RPS6P2-201ENST00000454208 705 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AC140172.1-201ENST00000502928 141 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 COX6B1P5-201ENST00000509843 249 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 MTCO2P15-201ENST00000532655 656 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 ZNF321P-202ENST00000550843 495 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 Z94722.1-201ENST00000604328 474 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 AC025574.1-201ENST00000554784 1653 ntBASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX2IPQ9Y2D8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms