Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 RPS27P20-201ENST00000492051 246 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 RNU6-559P-201ENST00000516151 98 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 SNORA25.17-201ENST00000517184 124 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AP000907.2-201ENST00000530827 353 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 TOMM20P1-201ENST00000534518 427 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AL845552.1-201ENST00000556820 323 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 FRG2DP-202ENST00000566967 323 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 RN7SL753P-201ENST00000581238 290 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AC015818.6-201ENST00000584274 634 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AC080078.3-201ENST00000605407 463 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AC004908.2-201ENST00000609090 574 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 SAMMSON-222ENST00000641901 2727 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 CDY19P-201ENST00000411668 1613 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 CDY18P-201ENST00000438294 1609 ntBASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
LIMD1Q9UGP4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 PPIAP22-201ENST00000358455 498 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AL356421.1-201ENST00000403255 413 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AL359715.1-201ENST00000404330 555 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 RN7SKP254-201ENST00000410685 310 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 MTND4LP17-201ENST00000414607 293 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 Z82205.1-201ENST00000428456 297 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 PPIAP13-201ENST00000434706 478 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AC096922.1-201ENST00000461635 651 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 RN7SKP196-201ENST00000516267 345 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 RNA5SP337-201ENST00000517007 109 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 RNU6-1220P-201ENST00000517126 108 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 CYP2C61P-201ENST00000604072 290 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AL080274.1-201ENST00000605565 220 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AC004908.1-201ENST00000606572 541 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AC107081.3-201ENST00000612715 2034 ntBASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.28□□□□□ -1.24
LIMD1Q9UGP4 SPATA31C1-201ENST00000420021 3895 ntBASIC7.27□□□□□ -1.24
LIMD1Q9UGP4 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.24
LIMD1Q9UGP4 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.27□□□□□ -1.24
LIMD1Q9UGP4 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 BX322650.1-201ENST00000332359 2143 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 Y_RNA.146-201ENST00000363549 102 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 RNU4-48P-201ENST00000365559 182 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 RNU6-441P-201ENST00000384545 106 ntBASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LIMD1Q9UGP4 AC005522.1-201ENST00000395416 346 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms