Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 MIR375-201ENST00000362103 64 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 RNA5SP394-201ENST00000364216 119 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 NUDT19P3-201ENST00000404698 555 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AL009179.1-201ENST00000406085 265 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AL139098.1-201ENST00000407291 389 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC099535.1-201ENST00000408928 371 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 RN7SKP240-201ENST00000410583 375 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 RPS15AP38-201ENST00000413110 372 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AL136133.1-201ENST00000413694 376 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 MGAT2P2-201ENST00000427194 797 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 RPL7P56-201ENST00000429441 717 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC244035.1-201ENST00000430042 390 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AL513175.1-201ENST00000431492 780 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 USP9YP28-201ENST00000435142 589 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 MTCYBP39-201ENST00000437562 491 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AL138878.2-201ENST00000440581 1241 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 RPS10P18-201ENST00000442662 495 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 ACTG1P13-201ENST00000486987 1043 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC005912.1-201ENST00000495392 255 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC091912.1-201ENST00000511351 248 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 Y_RNA.695-201ENST00000516715 107 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 TOMM20P1-201ENST00000534518 427 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC011260.1-201ENST00000578420 472 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 WISP1-OT1-201ENST00000602893 642 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 U73023.1-201ENST00000603134 700 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AL139286.2-201ENST00000606838 396 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC005332.6-201ENST00000613178 446 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC107982.1-201ENST00000507171 1300 ntBASIC5.13□□□□□ -1.59
RLIMQ9NVW2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RLIMQ9NVW2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 AC026523.2-201ENST00000625039 7739 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 OR52B3P-201ENST00000314715 928 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 Y_RNA.18-201ENST00000362461 102 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 RNU6-492P-201ENST00000363035 104 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 RNU6-621P-201ENST00000364752 109 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 RN7SKP81-201ENST00000365603 331 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 BOLA3P4-201ENST00000418151 400 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 OR6C5P-201ENST00000452388 923 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 NDUFA5P7-201ENST00000452914 242 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 RPL37P3-201ENST00000456825 293 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 AC011476.1-201ENST00000466725 307 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.12□□□□□ -1.59
RLIMQ9NVW2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.12□□□□□ -1.59
RLIMQ9NVW2 AC010424.1-201ENST00000506336 297 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms