Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SYT14P1-201ENST00000481459 721 ntBASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 RPL32P9-201ENST00000487963 407 ntBASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AC139783.2-201ENST00000504847 1145 ntBASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AC091868.1-201ENST00000508746 304 ntBASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AC067904.2-201ENST00000517322 1283 ntBASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AC051619.2-201ENST00000559063 397 ntBASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 BNIP3P32-201ENST00000600015 554 ntBASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AL512782.1-201ENST00000603093 364 ntBASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AL021707.7-201ENST00000607991 416 ntBASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AC119674.1-212ENST00000641155 993 ntBASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCNB1IP1Q9NPC3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.15□□□□□ -1.74
CCNB1IP1Q9NPC3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCNB1IP1Q9NPC3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCNB1IP1Q9NPC3 AC018529.3-201ENST00000624212 2254 ntBASIC4.15□□□□□ -1.74
CCNB1IP1Q9NPC3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CCNB1IP1Q9NPC3 AC135352.1-201ENST00000506173 1418 ntBASIC4.15□□□□□ -1.74
CCNB1IP1Q9NPC3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCNB1IP1Q9NPC3 RNU6-618P-201ENST00000363518 112 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 RNU6-891P-201ENST00000384280 111 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 Z98745.1-201ENST00000402553 494 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 RNA5SP113-201ENST00000410486 84 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 RNA5SP39-201ENST00000411245 120 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 ARL5AP3-201ENST00000439327 386 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 RPL12P3-201ENST00000440080 396 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 TXNP2-201ENST00000443918 295 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 H2AFZP5-201ENST00000446960 382 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AL935212.3-201ENST00000450729 284 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 RPS3AP41-201ENST00000462701 778 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 PRELID3BP7-201ENST00000503606 469 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 RNA5SP497-201ENST00000516081 97 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 BRD9P1-201ENST00000529855 560 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AP001880.2-201ENST00000538233 448 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 ADAD1P2-201ENST00000588476 646 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 HMGB1P51-201ENST00000605166 638 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC004948.1-201ENST00000609858 672 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC107905.1-201ENST00000616204 426 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 RMST_9.1-201ENST00000619945 193 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC087385.3-201ENST00000620477 187 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AL445528.2-201ENST00000620582 470 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC067931.1-201ENST00000624190 671 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AL356121.2-201ENST00000624715 780 ntBASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.15□□□□□ -1.75
CCNB1IP1Q9NPC3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms