Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC005008.1-201ENST00000456151 612 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC079804.1-201ENST00000461922 436 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 GOLGA5P1-201ENST00000507317 980 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 KRT19P6-201ENST00000510983 209 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 UBTFL9-201ENST00000534504 1148 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC027176.2-201ENST00000559166 746 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 AC008079.2-201ENST00000623543 20396 ntBASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KIAA1549Q9HCM3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
KIAA1549Q9HCM3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
KIAA1549Q9HCM3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 CDY11P-201ENST00000447168 1651 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 AL122126.1-201ENST00000546905 1318 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 RN7SKP280-201ENST00000364196 304 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 BMS1P3-201ENST00000372011 932 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 CASKP1-201ENST00000412870 582 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 RAB9AP4-201ENST00000415230 609 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 RPS27AP13-201ENST00000498403 237 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 AP003730.1-201ENST00000524605 285 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 AC110743.1-201ENST00000584870 478 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 AC025175.1-201ENST00000606482 759 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 SAMMSON-213ENST00000641336 1521 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 MAPK10-372ENST00000641954 3413 ntBASIC3.77□□□□□ -1.81
KIAA1549Q9HCM3 HSPD1P11-201ENST00000508643 1702 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 TTC39DP-201ENST00000416781 1688 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 RPL21P89-201ENST00000444021 467 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 PSMC1P13-201ENST00000458195 985 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 SNORA84-201ENST00000459229 133 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 HMGB1P23-201ENST00000518743 568 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 AC068254.2-201ENST00000623938 3577 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 RNA5SP399-201ENST00000364003 117 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 AMZ2P2-201ENST00000406819 1057 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 RNA5SP146-201ENST00000410743 123 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 RNA5SP306-201ENST00000411087 107 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 AC020593.1-201ENST00000507399 299 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 FTH1P21-201ENST00000512179 511 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 IGLV3-26-201ENST00000520756 302 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 AL021997.2-201ENST00000615674 271 ntBASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KIAA1549Q9HCM3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 RNA5SP130-201ENST00000364431 114 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 AL050305.1-201ENST00000399993 1230 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 AL607077.1-201ENST00000401718 499 ntBASIC3.75□□□□□ -1.81
KIAA1549Q9HCM3 RN7SKP182-201ENST00000410772 298 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms