Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU4-5P-201ENST00000607255 135 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC013562.2-201ENST00000611632 603 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC078880.5-201ENST00000617845 421 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 Z98755.1-201ENST00000407015 1384 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 MTND4P8-201ENST00000514997 1362 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.13□□□□□ -1.59
EBF3Q9H4W6 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
EBF3Q9H4W6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 MTHFD2P5-201ENST00000320415 844 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 SNORD116-1-201ENST00000384335 95 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 GLULP6-201ENST00000399502 913 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 RNU4-27P-201ENST00000410889 139 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AL158050.1-201ENST00000416077 457 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 KRR1P1-201ENST00000419430 803 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC069213.2-201ENST00000420238 366 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 NANOGP5-201ENST00000424456 877 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC012519.1-201ENST00000424588 610 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 KCTD10P1-201ENST00000434203 625 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 RPS29P9-201ENST00000440360 171 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 MTCYBP12-201ENST00000440559 1134 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 BX842559.2-201ENST00000451418 605 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AL591473.1-201ENST00000464297 313 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 SETP6-201ENST00000479329 568 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC091544.1-201ENST00000484702 348 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 HMGB1P3-201ENST00000502802 616 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC067904.2-201ENST00000517322 1283 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AP001207.2-201ENST00000519490 539 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC119751.7-201ENST00000600494 245 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AL139344.1-201ENST00000605228 195 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AP005229.2-201ENST00000609980 697 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AL731566.2-201ENST00000618971 317 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 MTND4P10-201ENST00000446199 1363 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 AC093536.2-201ENST00000565257 1406 ntBASIC5.12□□□□□ -1.59
EBF3Q9H4W6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
EBF3Q9H4W6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 MAPK10-263ENST00000641052 4307 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC083843.3-201ENST00000623679 2186 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 ATP5HP3-201ENST00000396994 486 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 FABP12P1-201ENST00000401911 322 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 RN7SKP100-201ENST00000411258 284 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 MTND4P22-201ENST00000413116 1169 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms