Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 AC239809.1-201ENST00000450470 217 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 NDUFS5P3-201ENST00000450668 321 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM4Q9C037 AL592156.1-201ENST00000508758 304 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 SAP18P1-201ENST00000512058 390 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 RNU6-709P-201ENST00000517257 104 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 AC135001.1-201ENST00000544546 283 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 AC020910.3-201ENST00000603701 874 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 ARF4P1-201ENST00000605447 541 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 MIR4727-201ENST00000622232 55 ntBASIC4.55□□□□□ -1.68
TRIM4Q9C037 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM4Q9C037 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TRIM4Q9C037 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM4Q9C037 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM4Q9C037 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM4Q9C037 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM4Q9C037 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM4Q9C037 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM4Q9C037 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 OR51B3P-201ENST00000412287 913 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 YWHAEP5-201ENST00000431545 765 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 AC005154.2-201ENST00000438110 379 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 Z95152.1-201ENST00000453556 656 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM4Q9C037 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 AC139783.2-201ENST00000504847 1145 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM4Q9C037 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM4Q9C037 RN7SL690P-201ENST00000582087 240 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 BNIP3P19-201ENST00000605397 577 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 AC023043.4-201ENST00000612081 449 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 AC243960.7-201ENST00000623532 707 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 AC034229.5-201ENST00000624258 185 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 Z73965.1-201ENST00000623412 2297 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM4Q9C037 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM4Q9C037 AC134882.1-201ENST00000603738 1676 ntBASIC4.54□□□□□ -1.68
TRIM4Q9C037 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
TRIM4Q9C037 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM4Q9C037 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TRIM4Q9C037 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM4Q9C037 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM4Q9C037 MIR129-1-201ENST00000384972 72 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRIM4Q9C037 ATP5F1P3-201ENST00000397213 657 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM4Q9C037 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM4Q9C037 RPEP3-201ENST00000425462 676 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM4Q9C037 EEF1A1P1-201ENST00000447052 739 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 PSMC1P13-201ENST00000458195 985 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC011276.1-201ENST00000469688 323 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC116562.1-201ENST00000485355 781 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC108022.1-201ENST00000493466 478 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC007016.1-201ENST00000512110 244 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC023632.4-201ENST00000517783 191 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC092851.1-201ENST00000535964 478 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC093227.2-201ENST00000589357 285 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC103858.2-201ENST00000621471 543 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM4Q9C037 AL359715.5-201ENST00000623431 443 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 OR8B1P-202ENST00000641132 1178 ntBASIC4.53□□□□□ -1.68
TRIM4Q9C037 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM4Q9C037 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.53□□□□□ -1.69
TRIM4Q9C037 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM4Q9C037 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms