Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AC069240.1-201ENST00000548774 375 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AL137246.1-201ENST00000607072 977 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 AC090948.2-201ENST00000607363 564 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 MIR8059-201ENST00000620427 81 ntBASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.26□□□□□ -1.57
RPAP1Q9BWH6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 LARP1BP1-201ENST00000506036 1359 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 MIR331-201ENST00000362302 94 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 RN7SKP280-201ENST00000364196 304 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 RPL32P23-201ENST00000397237 405 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 EIF4A1P3-201ENST00000411521 244 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 AL389915.1-201ENST00000422463 466 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 RPS26P28-201ENST00000470806 348 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 AC012158.1-204ENST00000483430 465 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 AC020593.1-201ENST00000507399 299 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 MED28P5-201ENST00000528254 438 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 AC087468.1-201ENST00000604365 630 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 SNX18P1Y-201ENST00000616231 511 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 AL669942.2-201ENST00000620352 697 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 AL929601.4-201ENST00000613011 1341 ntBASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPAP1Q9BWH6 AC068254.2-201ENST00000623938 3577 ntBASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 AC092435.4-201ENST00000623012 4159 ntBASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 AL356968.2-201ENST00000412769 1257 ntBASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 RCC2P2-201ENST00000422174 918 ntBASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 GEMIN8P3-201ENST00000445417 720 ntBASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 AC034105.4-201ENST00000568304 277 ntBASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 AC022960.2-201ENST00000616300 666 ntBASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPAP1Q9BWH6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 AL158163.1-201ENST00000603915 1649 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 RNA5SP52-201ENST00000362448 134 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 RPS27AP11-201ENST00000402798 447 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 RPL36AP36-201ENST00000418616 301 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 RPL23AP38-201ENST00000423801 469 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 PSMC1P13-201ENST00000458195 985 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 AC104849.1-201ENST00000462623 405 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 RPS7P7-201ENST00000463499 571 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 AC022034.3-201ENST00000471393 478 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 RPL5P16-201ENST00000471467 790 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 AL121834.1-201ENST00000572284 509 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 AC006116.5-201ENST00000591936 559 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 AC245389.1-201ENST00000605141 529 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 AC025175.1-201ENST00000606482 759 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 RNU6-84P-201ENST00000607737 102 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 AL354950.1-201ENST00000614150 568 ntBASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.23□□□□□ -1.57
RPAP1Q9BWH6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms