Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.81□□□□□ -1.8
VGLL1Q99990 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.81□□□□□ -1.8
VGLL1Q99990 SNORD116-12-201ENST00000384468 92 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 RNU6-636P-201ENST00000384598 107 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 MIR143-201ENST00000385300 106 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VGLL1Q99990 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.81□□□□□ -1.8
VGLL1Q99990 AL590806.1-201ENST00000415818 853 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.81□□□□□ -1.8
VGLL1Q99990 HMGB1P49-201ENST00000418882 569 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 C1DP1-201ENST00000426049 402 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 CYCSP12-201ENST00000437729 300 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 TXNP5-201ENST00000441043 315 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 PCNPP2-201ENST00000441651 455 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.81□□□□□ -1.8
VGLL1Q99990 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VGLL1Q99990 AL050341.1-201ENST00000447743 313 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AC144530.1-201ENST00000452862 555 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VGLL1Q99990 AC107015.1-201ENST00000466902 747 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VGLL1Q99990 AC004815.1-201ENST00000484185 331 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 RN7SL547P-201ENST00000490793 290 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.81□□□□□ -1.8
VGLL1Q99990 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.81□□□□□ -1.8
VGLL1Q99990 AC010486.2-201ENST00000505572 483 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.81□□□□□ -1.8
VGLL1Q99990 AC008837.1-201ENST00000511513 412 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.81□□□□□ -1.8
VGLL1Q99990 RNA5SP249-201ENST00000516127 99 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 Y_RNA.688-201ENST00000516565 95 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.81□□□□□ -1.8
VGLL1Q99990 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.81□□□□□ -1.8
VGLL1Q99990 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.81□□□□□ -1.8
VGLL1Q99990 AC104417.1-201ENST00000523974 751 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.81□□□□□ -1.8
VGLL1Q99990 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VGLL1Q99990 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.81□□□□□ -1.8
VGLL1Q99990 AC006518.2-201ENST00000542513 940 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 DYNLL1P4-201ENST00000549314 266 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AC011611.5-201ENST00000552477 578 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 SMARCE1P3-201ENST00000553649 1231 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.81□□□□□ -1.8
VGLL1Q99990 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.81□□□□□ -1.8
VGLL1Q99990 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.81□□□□□ -1.8
VGLL1Q99990 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.81□□□□□ -1.8
VGLL1Q99990 AC091057.2-201ENST00000602594 792 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AC133552.5-201ENST00000604266 540 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AP005432.2-201ENST00000608162 586 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
VGLL1Q99990 MIR8069-1-201ENST00000616627 86 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AP004607.9-201ENST00000618202 316 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 MIR8069-2-201ENST00000621412 86 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.81□□□□□ -1.8
VGLL1Q99990 AL121594.5-201ENST00000631724 573 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VGLL1Q99990 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VGLL1Q99990 LINC01808-202ENST00000641680 1116 ntBASIC3.81□□□□□ -1.8
VGLL1Q99990 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VGLL1Q99990 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VGLL1Q99990 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VGLL1Q99990 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VGLL1Q99990 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VGLL1Q99990 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.81□□□□□ -1.8
VGLL1Q99990 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.81□□□□□ -1.8
VGLL1Q99990 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.81□□□□□ -1.8
VGLL1Q99990 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VGLL1Q99990 AL592182.3-201ENST00000642132 3304 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VGLL1Q99990 ZNF876P-202ENST00000398732 1485 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 MTCO1P18-201ENST00000455518 1419 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VGLL1Q99990 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VGLL1Q99990 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.8□□□□□ -1.8
VGLL1Q99990 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VGLL1Q99990 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VGLL1Q99990 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VGLL1Q99990 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VGLL1Q99990 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VGLL1Q99990 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.8□□□□□ -1.8
VGLL1Q99990 MIR323A-201ENST00000362199 86 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 RNU6-1214P-201ENST00000363650 109 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 RN7SKP113-201ENST00000363891 295 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.8□□□□□ -1.8
VGLL1Q99990 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VGLL1Q99990 MIR600-201ENST00000385007 98 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.8□□□□□ -1.8
VGLL1Q99990 AL121834.1-202ENST00000404494 277 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 MIR1182-201ENST00000408363 97 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.8□□□□□ -1.8
VGLL1Q99990 AC009518.2-201ENST00000418056 731 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 ELOCP9-201ENST00000418624 239 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 RPS4XP16-201ENST00000427198 791 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 MTCYBP12-201ENST00000440559 1134 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.8□□□□□ -1.8
VGLL1Q99990 AP000281.1-201ENST00000444036 316 ntBASIC3.8□□□□□ -1.8
VGLL1Q99990 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.8□□□□□ -1.8
VGLL1Q99990 AL591363.1-201ENST00000450091 483 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms