Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
ABCA3Q99758 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.43□□□□□ -1.54
ABCA3Q99758 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.43□□□□□ -1.54
ABCA3Q99758 CYCSP32-201ENST00000440548 321 ntBASIC5.43□□□□□ -1.54
ABCA3Q99758 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.43□□□□□ -1.54
ABCA3Q99758 SETP14-201ENST00000497538 873 ntBASIC5.43□□□□□ -1.54
ABCA3Q99758 AL358832.1-201ENST00000497800 389 ntBASIC5.43□□□□□ -1.54
ABCA3Q99758 RNA5SP230-201ENST00000517039 122 ntBASIC5.43□□□□□ -1.54
ABCA3Q99758 SNORA70.24-201ENST00000517233 118 ntBASIC5.43□□□□□ -1.54
ABCA3Q99758 OR8I1P-201ENST00000529291 931 ntBASIC5.43□□□□□ -1.54
ABCA3Q99758 AC091516.1-201ENST00000549191 703 ntBASIC5.43□□□□□ -1.54
ABCA3Q99758 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.42□□□□□ -1.54
ABCA3Q99758 AL672167.1-204ENST00000641875 3017 ntBASIC5.42□□□□□ -1.54
ABCA3Q99758 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
ABCA3Q99758 CASC19-204ENST00000641001 2055 ntBASIC5.42□□□□□ -1.54
ABCA3Q99758 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
ABCA3Q99758 SNORA60-201ENST00000362396 134 ntBASIC5.42□□□□□ -1.54
ABCA3Q99758 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.42□□□□□ -1.54
ABCA3Q99758 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.42□□□□□ -1.54
ABCA3Q99758 WBP1LP4-201ENST00000505043 344 ntBASIC5.42□□□□□ -1.54
ABCA3Q99758 RNA5SP303-201ENST00000516192 130 ntBASIC5.42□□□□□ -1.54
ABCA3Q99758 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ABCA3Q99758 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ABCA3Q99758 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ABCA3Q99758 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.42□□□□□ -1.54
ABCA3Q99758 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ABCA3Q99758 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
ABCA3Q99758 MAPK10-286ENST00000641208 8747 ntBASIC5.41□□□□□ -1.54
ABCA3Q99758 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.41□□□□□ -1.54
ABCA3Q99758 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
ABCA3Q99758 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
ABCA3Q99758 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.41□□□□□ -1.54
ABCA3Q99758 PDSS1P1-201ENST00000422953 1114 ntBASIC5.41□□□□□ -1.54
ABCA3Q99758 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.41□□□□□ -1.54
ABCA3Q99758 HSPD1P15-201ENST00000505573 1122 ntBASIC5.41□□□□□ -1.54
ABCA3Q99758 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.41□□□□□ -1.54
ABCA3Q99758 AC124068.1-201ENST00000563131 678 ntBASIC5.41□□□□□ -1.54
ABCA3Q99758 AL031666.3-201ENST00000609320 1006 ntBASIC5.41□□□□□ -1.54
ABCA3Q99758 MIR7975-201ENST00000619350 68 ntBASIC5.41□□□□□ -1.54
ABCA3Q99758 AC024023.1-201ENST00000624530 922 ntBASIC5.41□□□□□ -1.54
ABCA3Q99758 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.41□□□□□ -1.54
ABCA3Q99758 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
ABCA3Q99758 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ABCA3Q99758 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ABCA3Q99758 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ABCA3Q99758 RNA5SP97-201ENST00000365006 84 ntBASIC5.4□□□□□ -1.54
ABCA3Q99758 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ABCA3Q99758 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
ABCA3Q99758 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.4□□□□□ -1.54
ABCA3Q99758 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.4□□□□□ -1.54
ABCA3Q99758 VTI1BP4-201ENST00000427516 527 ntBASIC5.4□□□□□ -1.54
ABCA3Q99758 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.4□□□□□ -1.54
ABCA3Q99758 AC093853.1-201ENST00000515689 483 ntBASIC5.4□□□□□ -1.54
ABCA3Q99758 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ABCA3Q99758 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.4□□□□□ -1.54
ABCA3Q99758 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.4□□□□□ -1.54
ABCA3Q99758 MIR3922-201ENST00000585192 84 ntBASIC5.4□□□□□ -1.54
ABCA3Q99758 AC022146.1-201ENST00000595307 847 ntBASIC5.4□□□□□ -1.54
ABCA3Q99758 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.4□□□□□ -1.54
ABCA3Q99758 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
ABCA3Q99758 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ABCA3Q99758 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
ABCA3Q99758 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ABCA3Q99758 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ABCA3Q99758 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.4□□□□□ -1.55
ABCA3Q99758 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ABCA3Q99758 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
ABCA3Q99758 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
ABCA3Q99758 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
ABCA3Q99758 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ABCA3Q99758 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.4□□□□□ -1.55
ABCA3Q99758 KATNBL1P2-201ENST00000433311 835 ntBASIC5.4□□□□□ -1.55
ABCA3Q99758 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.4□□□□□ -1.55
ABCA3Q99758 PPIAP15-201ENST00000479662 484 ntBASIC5.4□□□□□ -1.55
ABCA3Q99758 RN7SL293P-201ENST00000481765 281 ntBASIC5.4□□□□□ -1.55
ABCA3Q99758 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.4□□□□□ -1.55
ABCA3Q99758 NDUFA5P2-201ENST00000519723 344 ntBASIC5.4□□□□□ -1.55
ABCA3Q99758 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.4□□□□□ -1.55
ABCA3Q99758 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.4□□□□□ -1.55
ABCA3Q99758 AC027176.2-201ENST00000559166 746 ntBASIC5.4□□□□□ -1.55
ABCA3Q99758 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.4□□□□□ -1.55
ABCA3Q99758 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.4□□□□□ -1.55
ABCA3Q99758 AC244505.7-201ENST00000599675 272 ntBASIC5.4□□□□□ -1.55
ABCA3Q99758 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.4□□□□□ -1.55
ABCA3Q99758 AC008966.2-201ENST00000606157 453 ntBASIC5.4□□□□□ -1.55
ABCA3Q99758 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.4□□□□□ -1.55
ABCA3Q99758 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms