Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL022393.1-201ENST00000625142 1677 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS50Q96JG6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS50Q96JG6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS50Q96JG6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 RNU1-19P-201ENST00000363306 165 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 Y_RNA.169-201ENST00000363745 96 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 SNORA74A-201ENST00000364089 198 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 RNU6-178P-201ENST00000384631 104 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 RPL21P67-201ENST00000402896 478 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 NCSTNP1-201ENST00000406229 144 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 MIR1178-201ENST00000408396 91 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 RNA5SP498-201ENST00000411342 120 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 OR4K6P-201ENST00000416478 897 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 RPL7AP49-201ENST00000429522 581 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 FAM96AP1-201ENST00000430879 482 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AL591438.1-201ENST00000433508 581 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 RPL19P16-201ENST00000433839 588 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 CYCSP6-201ENST00000434498 302 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 LYPLA1P1-201ENST00000434514 622 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 OR6D1P-201ENST00000436165 939 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 RPL7P29-201ENST00000437151 728 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC019185.1-201ENST00000442718 389 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC233982.1-201ENST00000451247 436 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 RN7SL172P-201ENST00000460535 303 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 COPS8P2-201ENST00000473228 627 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 IGBP1P4-201ENST00000503202 879 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC008565.1-201ENST00000509046 885 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC016559.2-201ENST00000510759 359 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 HMGN1P9-201ENST00000515212 298 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 RNA5SP228-201ENST00000516232 133 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC016180.1-201ENST00000567945 403 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 MTND4LP24-201ENST00000572277 291 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 MIR4443-201ENST00000585052 53 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC040904.1-201ENST00000590850 223 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC125494.3-201ENST00000602759 455 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC100847.1-201ENST00000611316 481 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 VN1R74P-201ENST00000613259 503 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC025574.2-201ENST00000615621 514 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AL118522.2-201ENST00000616045 615 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC108359.1-201ENST00000616451 1211 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 STMN1P1-201ENST00000617809 440 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 uc_338.7-201ENST00000621834 124 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC145207.9-201ENST00000623802 325 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS50Q96JG6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS50Q96JG6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS50Q96JG6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS50Q96JG6 AL450326.2-201ENST00000421913 1962 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 AC100757.1-201ENST00000616872 1835 ntBASIC5.18□□□□□ -1.58
VPS50Q96JG6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS50Q96JG6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS50Q96JG6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AL078599.1-201ENST00000402075 293 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 SFR1P1-201ENST00000403720 688 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 BX510359.3-201ENST00000422168 306 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 OR6K4P-201ENST00000423179 955 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 RPL7L1P9-201ENST00000431298 745 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC092473.1-201ENST00000441098 221 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AL596266.1-201ENST00000448132 400 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS50Q96JG6 AL672138.1-201ENST00000450604 1015 ntBASIC5.17□□□□□ -1.58
VPS50Q96JG6 PRPF38AP1-201ENST00000451976 933 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms