Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AL512646.1-201ENST00000269395 1077 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 RNU1-83P-201ENST00000363426 164 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AL121834.1-202ENST00000404494 277 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 U3.35-201ENST00000408405 208 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 SNORA11C-201ENST00000408532 129 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 GTF2IP2-201ENST00000424290 697 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 OR52B5P-201ENST00000435337 951 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC004938.1-201ENST00000438468 308 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 RPL34P20-201ENST00000442771 351 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 KNOP1P3-201ENST00000446933 426 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC144530.1-201ENST00000452862 555 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC016550.1-201ENST00000505348 785 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 IGBP1P5-201ENST00000507524 1000 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC021146.3-201ENST00000511911 260 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 Y_RNA.719-201ENST00000517156 106 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC139103.1-201ENST00000534696 1030 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC011611.5-201ENST00000552477 578 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 OR11J2P-201ENST00000555298 907 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC008759.3-201ENST00000613300 508 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC018926.1-201ENST00000616335 435 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC018926.3-201ENST00000618841 406 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 MIR6837-201ENST00000620884 64 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC019206.1-201ENST00000621938 425 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AP002505.2-201ENST00000623585 696 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AC080188.3-201ENST00000624842 748 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 OR52B5P-202ENST00000641118 1110 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 CASC19-264ENST00000641912 1184 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS33AQ96AX1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
VPS33AQ96AX1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS33AQ96AX1 AC009951.1-201ENST00000623674 2614 ntBASIC4.65□□□□□ -1.66
VPS33AQ96AX1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS33AQ96AX1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS33AQ96AX1 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS33AQ96AX1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 YWHAEP5-201ENST00000431545 765 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 RPS26P40-201ENST00000435209 294 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 SPRYD7P1-201ENST00000443861 570 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 HSFY3P-201ENST00000444242 1191 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 TDGF1P1-201ENST00000445734 527 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AC000111.2-201ENST00000448200 210 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AC024558.1-201ENST00000505008 528 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 RN7SKP82-201ENST00000516786 223 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 NMNAT1P1-201ENST00000554095 876 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AC069304.3-201ENST00000603938 1084 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 IMMP1LP3-201ENST00000604197 224 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 uc_338.18-201ENST00000615451 175 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AL158196.1-201ENST00000616786 434 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AC099494.2-201ENST00000623371 978 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS33AQ96AX1 ZNF849P-201ENST00000594711 1566 ntBASIC4.65□□□□□ -1.67
VPS33AQ96AX1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS33AQ96AX1 RN7SKP15-201ENST00000364742 309 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 RNU6-468P-201ENST00000384003 109 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 SNORD96B-201ENST00000386148 79 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 HMGB3P19-201ENST00000403971 560 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 FABP7P1-201ENST00000424004 391 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 IPMKP1-201ENST00000425988 855 ntBASIC4.64□□□□□ -1.67
VPS33AQ96AX1 DEFB130D-201ENST00000426866 237 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms