Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC245100.7-201ENST00000609678 442 ntBASIC3.98□□□□□ -1.77
BEST4Q8NFU0 AL627230.1-201ENST00000613077 211 ntBASIC3.98□□□□□ -1.77
BEST4Q8NFU0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.98□□□□□ -1.77
BEST4Q8NFU0 AL121873.1-201ENST00000616013 524 ntBASIC3.98□□□□□ -1.77
BEST4Q8NFU0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BEST4Q8NFU0 AC015726.3-201ENST00000624501 418 ntBASIC3.98□□□□□ -1.77
BEST4Q8NFU0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.98□□□□□ -1.77
BEST4Q8NFU0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BEST4Q8NFU0 THAP12P4-201ENST00000528321 2266 ntBASIC3.98□□□□□ -1.77
BEST4Q8NFU0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BEST4Q8NFU0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BEST4Q8NFU0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
BEST4Q8NFU0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BEST4Q8NFU0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC099654.2-201ENST00000433031 1980 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 HMGB1P10-201ENST00000395823 563 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 RPL23AP48-201ENST00000406913 488 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 GTF2IP5-201ENST00000414608 731 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 BMS1P13-201ENST00000417301 885 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 NANOGP6-201ENST00000429190 847 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 MTCO1P43-201ENST00000431831 488 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 HLA-N-201ENST00000437516 135 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 GXYLT1P1-201ENST00000446657 490 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AL451050.1-201ENST00000450126 415 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 CYCSP42-201ENST00000450823 238 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC243772.1-201ENST00000451620 410 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC023141.9-201ENST00000458734 412 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 SCARNA10-201ENST00000459255 330 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 RPL21P18-201ENST00000469899 480 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 RN7SL809P-201ENST00000482040 297 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC090013.1-201ENST00000485147 480 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 SCARNA21.2-201ENST00000516600 166 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AP003355.1-201ENST00000518956 587 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC090281.1-201ENST00000523019 276 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 MTND5P21-201ENST00000531961 522 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AL049870.4-201ENST00000555741 486 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 NDUFA5P11-201ENST00000567995 343 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC090666.1-201ENST00000578241 445 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 SNORD95-201ENST00000579879 68 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC011447.4-201ENST00000587562 111 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC008759.1-201ENST00000589783 983 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC008966.2-201ENST00000606157 453 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC020634.1-201ENST00000608701 549 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AL023881.1-201ENST00000621088 301 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 AC015813.6-201ENST00000624409 5808 ntBASIC3.97□□□□□ -1.77
BEST4Q8NFU0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BEST4Q8NFU0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.96□□□□□ -1.77
BEST4Q8NFU0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.96□□□□□ -1.77
BEST4Q8NFU0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
BEST4Q8NFU0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
BEST4Q8NFU0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
BEST4Q8NFU0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
BEST4Q8NFU0 VPS35P1-201ENST00000563400 1518 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BEST4Q8NFU0 MTND5P11-201ENST00000511037 1812 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BEST4Q8NFU0 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
BEST4Q8NFU0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
BEST4Q8NFU0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
BEST4Q8NFU0 SNORD74.4-201ENST00000364129 80 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 RNA5SP513-201ENST00000364648 118 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 RNA5SP428-201ENST00000365129 132 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 RNU6-185P-201ENST00000384421 107 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 MIR143-201ENST00000385300 106 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BEST4Q8NFU0 MIR708-201ENST00000390708 88 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BEST4Q8NFU0 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BEST4Q8NFU0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.96□□□□□ -1.78
BEST4Q8NFU0 HMGB1P13-201ENST00000406019 642 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 AC105402.1-201ENST00000413336 545 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 AL606495.1-201ENST00000422100 813 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 AL354692.1-201ENST00000423044 315 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.96□□□□□ -1.78
BEST4Q8NFU0 CFL1P1-202ENST00000432948 411 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 AL138899.2-201ENST00000439139 499 ntBASIC3.96□□□□□ -1.78
BEST4Q8NFU0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms