Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC090751.1-201ENST00000566966 267 ntBASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 MIR1273E-201ENST00000581165 102 ntBASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 AC078795.2-201ENST00000602835 1252 ntBASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 AC093765.1-201ENST00000603758 881 ntBASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 AL445423.1-201ENST00000609941 536 ntBASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 AC015712.7-201ENST00000615211 635 ntBASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 AC116563.2-201ENST00000624751 535 ntBASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.31□□□□□ -1.56
SIMC1Q8NDZ2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC027514.1-201ENST00000588561 1603 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 RNU6-543P-201ENST00000362576 108 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 RNU6-517P-201ENST00000384362 110 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 RPL30P16-201ENST00000419341 429 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AK4P4-201ENST00000419465 646 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC019178.2-201ENST00000423595 505 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AL662874.1-201ENST00000426065 230 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 NPM1P24-201ENST00000428039 894 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AL353597.2-202ENST00000434901 373 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 TCEA1P3-201ENST00000443005 880 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 OR51B8P-201ENST00000449892 769 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC097262.1-201ENST00000452559 548 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 BZW1P2-201ENST00000473537 826 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 SYPL1P1-201ENST00000473622 768 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 RN7SL570P-201ENST00000484405 292 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 RPS23P1-201ENST00000491662 432 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 IGKV2-18-201ENST00000522607 343 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC137627.1-201ENST00000545761 289 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AL031985.2-201ENST00000600955 480 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 BNIP3P30-201ENST00000601184 574 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC067959.1-201ENST00000604334 379 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC005377.1-201ENST00000605126 456 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AP001596.2-201ENST00000608410 312 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC072039.2-201ENST00000608883 439 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC106872.5-201ENST00000508856 1416 ntBASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.3□□□□□ -1.56
SIMC1Q8NDZ2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 MIR375-201ENST00000362103 64 ntBASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 RN7SKP292-201ENST00000365522 317 ntBASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 RNA5SP30-201ENST00000365552 115 ntBASIC5.29□□□□□ -1.56
SIMC1Q8NDZ2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms