Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC025627.2-201ENST00000576220 160 ntBASIC6.32□□□□□ -1.4
VPS8Q8N3P4 MIR4286-201ENST00000580651 93 ntBASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AL451044.1-201ENST00000604867 238 ntBASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AL592436.1-201ENST00000605135 558 ntBASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AL353600.1-201ENST00000608148 251 ntBASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AC090246.1-201ENST00000616499 426 ntBASIC6.32□□□□□ -1.4
VPS8Q8N3P4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS8Q8N3P4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VPS8Q8N3P4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VPS8Q8N3P4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.31□□□□□ -1.4
VPS8Q8N3P4 AC023632.6-201ENST00000624338 2177 ntBASIC6.31□□□□□ -1.4
VPS8Q8N3P4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VPS8Q8N3P4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VPS8Q8N3P4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VPS8Q8N3P4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.31□□□□□ -1.4
VPS8Q8N3P4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.31□□□□□ -1.4
VPS8Q8N3P4 RN7SL585P-201ENST00000470538 280 ntBASIC6.31□□□□□ -1.4
VPS8Q8N3P4 AC110792.1-201ENST00000491826 472 ntBASIC6.31□□□□□ -1.4
VPS8Q8N3P4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
VPS8Q8N3P4 AC120057.2-201ENST00000571520 271 ntBASIC6.31□□□□□ -1.4
VPS8Q8N3P4 AC090312.1-201ENST00000580637 348 ntBASIC6.31□□□□□ -1.4
VPS8Q8N3P4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.31□□□□□ -1.4
VPS8Q8N3P4 AC073530.2-201ENST00000623987 261 ntBASIC6.31□□□□□ -1.4
VPS8Q8N3P4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.31□□□□□ -1.4
VPS8Q8N3P4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 AC120036.2-201ENST00000509729 1474 ntBASIC6.3□□□□□ -1.4
VPS8Q8N3P4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 Z95331.1-201ENST00000623075 23112 ntBASIC6.3□□□□□ -1.4
VPS8Q8N3P4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 AC091516.1-201ENST00000549191 703 ntBASIC6.3□□□□□ -1.4
VPS8Q8N3P4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 AC012417.1-201ENST00000582307 1039 ntBASIC6.3□□□□□ -1.4
VPS8Q8N3P4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 AC093227.2-201ENST00000589357 285 ntBASIC6.3□□□□□ -1.4
VPS8Q8N3P4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.3□□□□□ -1.4
VPS8Q8N3P4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 AC095038.2-201ENST00000621464 1070 ntBASIC6.3□□□□□ -1.4
VPS8Q8N3P4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 AC092435.4-201ENST00000623012 4159 ntBASIC6.3□□□□□ -1.4
VPS8Q8N3P4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.3□□□□□ -1.4
VPS8Q8N3P4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 SNORD35B-201ENST00000363660 87 ntBASIC6.29□□□□□ -1.4
VPS8Q8N3P4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 RNU6-213P-201ENST00000384051 104 ntBASIC6.29□□□□□ -1.4
VPS8Q8N3P4 RNU6-628P-201ENST00000410675 107 ntBASIC6.29□□□□□ -1.4
VPS8Q8N3P4 NPM1P25-201ENST00000429734 854 ntBASIC6.29□□□□□ -1.4
VPS8Q8N3P4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 RPS29P7-201ENST00000439662 171 ntBASIC6.29□□□□□ -1.4
VPS8Q8N3P4 RRM2P4-201ENST00000441721 562 ntBASIC6.29□□□□□ -1.4
VPS8Q8N3P4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 RPS4XP15-201ENST00000489210 795 ntBASIC6.29□□□□□ -1.4
VPS8Q8N3P4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 SNX6P1-201ENST00000601728 1224 ntBASIC6.29□□□□□ -1.4
VPS8Q8N3P4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VPS8Q8N3P4 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS8Q8N3P4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
VPS8Q8N3P4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
VPS8Q8N3P4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
VPS8Q8N3P4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
VPS8Q8N3P4 PTMAP3-201ENST00000447474 330 ntBASIC6.28□□□□□ -1.4
VPS8Q8N3P4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.28□□□□□ -1.4
VPS8Q8N3P4 RPL31P61-201ENST00000496160 376 ntBASIC6.28□□□□□ -1.4
VPS8Q8N3P4 AC010460.1-201ENST00000507087 466 ntBASIC6.28□□□□□ -1.4
VPS8Q8N3P4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS8Q8N3P4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS8Q8N3P4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
VPS8Q8N3P4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS8Q8N3P4 AC006363.1-201ENST00000603806 463 ntBASIC6.28□□□□□ -1.4
VPS8Q8N3P4 AL773545.4-201ENST00000637262 310 ntBASIC6.28□□□□□ -1.4
VPS8Q8N3P4 AL513478.4-201ENST00000641636 310 ntBASIC6.28□□□□□ -1.4
VPS8Q8N3P4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS8Q8N3P4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 AC104118.1-201ENST00000607625 1589 ntBASIC6.27□□□□□ -1.41
VPS8Q8N3P4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms