Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 HMGB3P18-201ENST00000406327 590 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 NANOGP5-201ENST00000424456 877 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 MTND2P5-201ENST00000432656 1006 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AL035246.1-201ENST00000433554 1255 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 ELOCP11-201ENST00000436690 332 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 ELOCP16-201ENST00000444494 332 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 RPL6P9-201ENST00000466502 859 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 METTL15P1-201ENST00000481421 1045 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 RPS3AP6-201ENST00000484430 795 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 MYL12BP2-201ENST00000503948 512 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC098862.1-201ENST00000504991 413 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 HPRT1P1-201ENST00000509498 657 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 RNA5SP228-201ENST00000516232 133 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 RNA5SP392-201ENST00000516905 112 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 Y_RNA.717-201ENST00000517106 92 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 RNU6-1028P-201ENST00000517164 93 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 HMGB1P1-201ENST00000522557 636 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC025260.1-201ENST00000548858 430 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC006349.1-201ENST00000555526 235 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC027455.1-201ENST00000574104 594 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC091042.1-201ENST00000579213 173 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AL512782.1-201ENST00000603093 364 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 RNU4-5P-201ENST00000607255 135 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC006946.3-201ENST00000609791 756 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AL161616.1-201ENST00000611867 286 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AC140725.3-201ENST00000616193 880 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AL022401.1-201ENST00000619498 108 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 AL356863.1-201ENST00000623378 1080 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.16□□□□□ -1.58
SCN4BQ8IWT1 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SCN4BQ8IWT1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SCN4BQ8IWT1 AC004817.4-201ENST00000602396 3625 ntBASIC5.15□□□□□ -1.58
SCN4BQ8IWT1 STX3-208ENST00000641815 3236 ntBASIC5.15□□□□□ -1.58
SCN4BQ8IWT1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.15□□□□□ -1.58
SCN4BQ8IWT1 RNU6-236P-201ENST00000363886 106 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 RN7SKP16-201ENST00000410180 299 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AC013404.1-201ENST00000413068 249 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 FABP7P2-201ENST00000429946 379 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AC000111.2-201ENST00000448200 210 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 OR51B8P-201ENST00000449892 769 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 RPS17P2-201ENST00000461663 408 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 RN7SKP276-201ENST00000516242 268 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 OR10V3P-201ENST00000525712 725 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 CR383656.6-201ENST00000550518 394 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AL049839.1-201ENST00000556151 657 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 MIR548Y-201ENST00000582739 110 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AC011453.2-201ENST00000603737 729 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AC104985.3-201ENST00000623479 597 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 AC011447.7-201ENST00000624228 1590 ntBASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.15□□□□□ -1.59
SCN4BQ8IWT1 GTF2H2B-203ENST00000508065 1432 ntBASIC5.14□□□□□ -1.59
SCN4BQ8IWT1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SCN4BQ8IWT1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SCN4BQ8IWT1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.14□□□□□ -1.59
SCN4BQ8IWT1 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms