Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RWDD4P1-201ENST00000488019 565 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AC104164.2-201ENST00000496953 495 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 PPM1AP1-201ENST00000502740 1135 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 PARP4P3-201ENST00000510265 317 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 IGLVIV-65-201ENST00000517313 360 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 DEFB109D-201ENST00000529497 240 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AC063949.1-201ENST00000552900 865 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AC124068.1-201ENST00000563131 678 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AC113403.1-201ENST00000604910 193 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AC140479.6-201ENST00000633535 357 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AC010329.2-201ENST00000595195 2737 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AL445437.1-201ENST00000623157 3087 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 CYP1D1P-201ENST00000416662 1433 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 MIR331-201ENST00000362302 94 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 RNA5SP52-201ENST00000362448 134 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 RNU6-1331P-201ENST00000363658 106 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AL121834.1-202ENST00000404494 277 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 RPL23AP48-201ENST00000406913 488 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 SNORA11F-201ENST00000408237 128 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 MIR1179-201ENST00000408703 91 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 RPL6P29-201ENST00000414863 865 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AC119751.6-201ENST00000416712 186 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 RPL23AP1-201ENST00000428990 471 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AL354710.1-201ENST00000453641 246 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 RPL23AP72-201ENST00000492447 435 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 PRELID3BP7-201ENST00000503606 469 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AC111000.3-201ENST00000508057 576 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 OR5M7P-201ENST00000526140 972 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AC069240.1-201ENST00000548774 375 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AC093765.1-201ENST00000603758 881 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AL354984.3-201ENST00000604803 325 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 MIR432-201ENST00000606207 94 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AL137246.1-201ENST00000607072 977 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AC239803.2-201ENST00000610161 430 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 AL132640.2-201ENST00000559968 1698 ntBASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.41□□□□□ -1.7
CDKL3Q8IVW4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDKL3Q8IVW4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.4□□□□□ -1.7
CDKL3Q8IVW4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CDKL3Q8IVW4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CDKL3Q8IVW4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDKL3Q8IVW4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDKL3Q8IVW4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDKL3Q8IVW4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDKL3Q8IVW4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CDKL3Q8IVW4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDKL3Q8IVW4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDKL3Q8IVW4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 RPL37P18-201ENST00000411602 243 ntBASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 OR2X1P-201ENST00000421144 687 ntBASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 TRGV7-201ENST00000427089 353 ntBASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 PHBP16-201ENST00000446318 950 ntBASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 RPL7P32-201ENST00000457119 744 ntBASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 MTND2P28-201ENST00000457540 1044 ntBASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 RPL7AP28-201ENST00000464513 571 ntBASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.4□□□□□ -1.71
CDKL3Q8IVW4 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms