Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 AL392112.1-201ENST00000605115 829 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC024941.1-201ENST00000612250 334 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC025253.1-201ENST00000613623 543 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 uc_338.7-201ENST00000621834 124 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC109454.4-201ENST00000623411 649 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 MIR4302-201ENST00000638058 60 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK3Q8IV63 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK3Q8IV63 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK3Q8IV63 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK3Q8IV63 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VRK3Q8IV63 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK3Q8IV63 Z83820.1-201ENST00000456978 1499 ntBASIC5.26□□□□□ -1.57
VRK3Q8IV63 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC019072.1-201ENST00000604535 1551 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC139426.3-201ENST00000605648 2059 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC010266.2-201ENST00000564741 3255 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 Y_RNA.248-201ENST00000364501 109 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 RN7SKP269-201ENST00000365545 319 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 RNU6-31P-201ENST00000384388 108 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 MIR143-201ENST00000385300 106 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 RNA5SP339-201ENST00000390987 122 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC136624.1-201ENST00000400791 413 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 RNU6-920P-201ENST00000410926 92 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 CFL1P1-202ENST00000432948 411 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 MTCO1P52-201ENST00000433928 531 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 GTF3AP5-201ENST00000442645 697 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC104634.1-201ENST00000452720 462 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 RNU6-941P-201ENST00000516346 108 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 RNA5SP373-201ENST00000517271 95 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 DUXAP2-201ENST00000519198 589 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC116553.2-201ENST00000564203 463 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 RPL10P14-201ENST00000565265 298 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC005341.1-201ENST00000571086 708 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 MIR548S-201ENST00000581352 82 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC012417.1-201ENST00000582307 1039 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 FKBP1AP1-201ENST00000594588 318 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AL356055.1-201ENST00000602528 446 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC126118.1-201ENST00000607744 628 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC105227.2-201ENST00000615075 605 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC010435.1-201ENST00000623353 1177 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 AP003400.3-201ENST00000624904 346 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 MIR4278-201ENST00000636094 69 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 AC087359.1-201ENST00000508335 1740 ntBASIC5.25□□□□□ -1.57
VRK3Q8IV63 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VRK3Q8IV63 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
VRK3Q8IV63 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AP000776.1-201ENST00000530032 1663 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 MTND4P31-201ENST00000425607 1343 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms