Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 GCSHP4-201ENST00000538792 439 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5□□□□□ -1.61
PRPF39Q86UA1 MIR4330-201ENST00000579077 105 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5□□□□□ -1.61
PRPF39Q86UA1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5□□□□□ -1.61
PRPF39Q86UA1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5□□□□□ -1.61
PRPF39Q86UA1 AL161616.1-201ENST00000611867 286 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 AC009318.3-201ENST00000616916 503 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5□□□□□ -1.61
PRPF39Q86UA1 AC132825.7-201ENST00000638744 335 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF39Q86UA1 AL353743.4-201ENST00000422653 1547 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 HSPA8P19-201ENST00000505359 1517 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF39Q86UA1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF39Q86UA1 AC092162.3-201ENST00000624511 1624 ntBASIC5□□□□□ -1.61
PRPF39Q86UA1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRPF39Q86UA1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF39Q86UA1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5□□□□□ -1.61
PRPF39Q86UA1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5□□□□□ -1.61
PRPF39Q86UA1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF39Q86UA1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRPF39Q86UA1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PRPF39Q86UA1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC099654.2-201ENST00000433031 1980 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 RNA5SP27-201ENST00000363839 119 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 SNORA56-201ENST00000383966 129 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 RPS4XP9-201ENST00000405151 780 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 RPL26P29-201ENST00000415623 438 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 EIF4HP2-201ENST00000424380 563 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 UBE2D3P3-201ENST00000426992 425 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC000111.2-201ENST00000448200 210 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 CYCSP34-201ENST00000458172 304 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 RN7SL517P-201ENST00000462240 305 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 RN7SL738P-201ENST00000470264 297 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 MTND1P36-201ENST00000522384 936 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC137768.1-201ENST00000549998 553 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC106785.3-201ENST00000564064 847 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 UBE2FP2-201ENST00000566646 462 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 TVP23CP2-201ENST00000571473 623 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 MTND4LP24-201ENST00000572277 291 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 MIR3667-201ENST00000581025 74 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 NF1P5-201ENST00000588287 448 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 PCNAP1-202ENST00000595299 752 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC011453.2-201ENST00000603737 729 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC026741.1-201ENST00000605892 482 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 AC100847.1-201ENST00000611316 481 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 ATE1-AS1-202ENST00000636460 506 ntBASIC4.99□□□□□ -1.61
PRPF39Q86UA1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF39Q86UA1 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 CYP1D1P-201ENST00000416662 1433 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 LINC01355-201ENST00000566551 5444 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 USP9YP4-201ENST00000424401 1745 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 MIR192-201ENST00000384915 110 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AL590139.1-201ENST00000416267 400 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 RGS17P1-201ENST00000423358 553 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AC007559.1-201ENST00000428736 355 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 TPT1P13-201ENST00000449760 499 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 AL035407.2-201ENST00000454090 378 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF39Q86UA1 RPL23AP56-201ENST00000460778 453 ntBASIC4.98□□□□□ -1.61
PRPF39Q86UA1 RPL21P47-201ENST00000483696 477 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms