Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LYSMD3Q7Z3D4 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 OR4G1P-203ENST00000641984 1631 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 RN7SKP118-201ENST00000364331 330 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 RNU6-702P-201ENST00000364982 107 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 SNORA70.3-201ENST00000365075 132 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 LDHAP5-201ENST00000394996 622 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 RPL23AP32-201ENST00000395315 459 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AC009302.1-201ENST00000417147 390 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 GAPDHP57-201ENST00000424400 585 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 VN1R38P-201ENST00000450265 887 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 RNU7-152P-201ENST00000458982 64 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 U8.20-201ENST00000459445 131 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AC010655.3-201ENST00000478818 450 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 RN7SL655P-201ENST00000486087 298 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 NUP58P1-201ENST00000502546 1738 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 MRPL57P6-201ENST00000506570 309 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 NPM1P41-201ENST00000512920 831 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 OR52H2P-201ENST00000514607 902 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 IGHV3-63-201ENST00000518422 341 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AL163153.1-201ENST00000554223 283 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AC008269.2-201ENST00000561915 1105 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 Z84480.1-201ENST00000605131 311 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 MIR193BHG-214ENST00000641765 509 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 BRAFP1-201ENST00000445336 2703 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 ELL2P4-201ENST00000446870 1376 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 ERCC6-202ENST00000374127 1782 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 CUBNP3-201ENST00000457461 1784 ntBASIC6.8□□□□□ -1.32
LYSMD3Q7Z3D4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 AC110597.1-201ENST00000562669 3176 ntBASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 AC012618.3-205ENST00000637896 1496 ntBASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.79□□□□□ -1.32
LYSMD3Q7Z3D4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms