Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FAM27E4-201ENST00000605259 342 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 AC211433.3-201ENST00000623770 375 ntBASIC7.82□□□□□ -1.16
VARS2Q5ST30 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARS2Q5ST30 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.82□□□□□ -1.16
VARS2Q5ST30 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 Z95327.2-201ENST00000414579 1873 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC245505.2-201ENST00000553572 3055 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 RNU6-417P-201ENST00000384712 107 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 AL035461.1-201ENST00000421490 332 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC134879.1-201ENST00000426062 394 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 RPS10P21-201ENST00000430654 475 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC019185.1-201ENST00000442718 389 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 GAPDHP33-201ENST00000443168 1013 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 FCF1P4-201ENST00000448326 183 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 NUTF2P3-201ENST00000448540 384 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC009244.1-201ENST00000450566 258 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 RNU7-136P-201ENST00000458819 69 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 RPL7L1P7-201ENST00000509986 724 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 SCARNA16.2-201ENST00000516520 172 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 MTND4P7-201ENST00000523876 130 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 AP001282.2-201ENST00000616149 309 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 AL138825.1-201ENST00000618587 192 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 AC130454.1-201ENST00000622948 401 ntBASIC7.81□□□□□ -1.16
VARS2Q5ST30 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.81□□□□□ -1.16
VARS2Q5ST30 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VARS2Q5ST30 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
VARS2Q5ST30 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
VARS2Q5ST30 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
VARS2Q5ST30 IGKV7-3-201ENST00000357453 298 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 Y_RNA.269-201ENST00000364685 89 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 SNORA70.8-201ENST00000384231 136 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 TRAPPC2P10-201ENST00000415662 323 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 COX6CP10-201ENST00000416832 224 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 RPL12P34-201ENST00000424532 479 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 USMG5P1-201ENST00000425964 177 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 TRAPPC2P5-201ENST00000426293 308 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 AL360081.1-201ENST00000428299 555 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 USP9YP30-201ENST00000430729 455 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 RPL23AP89-201ENST00000439324 255 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.8□□□□□ -1.16
VARS2Q5ST30 CYCSP44-201ENST00000448560 313 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 RPL29P29-201ENST00000448725 423 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 TPT1P12-201ENST00000448968 492 ntBASIC7.8□□□□□ -1.16
VARS2Q5ST30 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms