Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 SEC63P1-201ENST00000425785 1258 ntBASIC5.54□□□□□ -1.52
CCDC96Q2M329 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.54□□□□□ -1.52
CCDC96Q2M329 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.54□□□□□ -1.52
CCDC96Q2M329 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.54□□□□□ -1.52
CCDC96Q2M329 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 HIGD1AP5-201ENST00000529959 259 ntBASIC5.54□□□□□ -1.52
CCDC96Q2M329 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 AL110118.1-201ENST00000553543 400 ntBASIC5.54□□□□□ -1.52
CCDC96Q2M329 AL049830.4-201ENST00000555149 351 ntBASIC5.54□□□□□ -1.52
CCDC96Q2M329 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 AC242628.1-201ENST00000606810 391 ntBASIC5.54□□□□□ -1.52
CCDC96Q2M329 AC144521.1-201ENST00000607148 956 ntBASIC5.54□□□□□ -1.52
CCDC96Q2M329 AC243654.2-201ENST00000612843 443 ntBASIC5.54□□□□□ -1.52
CCDC96Q2M329 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC96Q2M329 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC96Q2M329 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC96Q2M329 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC96Q2M329 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC96Q2M329 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC96Q2M329 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.54□□□□□ -1.52
CCDC96Q2M329 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 AL136164.3-201ENST00000624429 3978 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 Y_RNA.110-201ENST00000363220 99 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 SNORA62.2-201ENST00000364672 152 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 RNU6-452P-201ENST00000384406 107 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 RNU6-883P-201ENST00000384597 107 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 AC004690.1-201ENST00000418216 328 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 MTCO1P52-201ENST00000433928 531 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 TPT1P13-201ENST00000449760 499 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 CEACAMP6-201ENST00000452007 574 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 AC079168.2-201ENST00000453977 416 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 RPL23AP53-201ENST00000521854 457 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 AC019227.1-201ENST00000526902 510 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 MIR4716-201ENST00000579628 84 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 RN7SL690P-201ENST00000582087 240 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 AC055764.2-201ENST00000610089 670 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 MIR7973-1-201ENST00000614683 76 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 AL162233.1-201ENST00000620014 944 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 AL596275.2-204ENST00000641628 552 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 AL596275.2-206ENST00000641957 626 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 AL133412.1-201ENST00000380194 2992 ntBASIC5.53□□□□□ -1.52
CCDC96Q2M329 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
CCDC96Q2M329 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC96Q2M329 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC96Q2M329 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC96Q2M329 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC96Q2M329 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC96Q2M329 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC96Q2M329 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC96Q2M329 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC96Q2M329 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC96Q2M329 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC96Q2M329 RNA5SP332-201ENST00000391063 115 ntBASIC5.52□□□□□ -1.53
CCDC96Q2M329 GLULP6-201ENST00000399502 913 ntBASIC5.52□□□□□ -1.53
CCDC96Q2M329 Z86062.1-201ENST00000406773 777 ntBASIC5.52□□□□□ -1.53
CCDC96Q2M329 AL591848.1-201ENST00000413092 322 ntBASIC5.52□□□□□ -1.53
CCDC96Q2M329 ATG4AP1-201ENST00000416893 538 ntBASIC5.52□□□□□ -1.53
CCDC96Q2M329 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC96Q2M329 OR2AH1P-201ENST00000425717 928 ntBASIC5.52□□□□□ -1.53
CCDC96Q2M329 MTND4LP14-201ENST00000429447 288 ntBASIC5.52□□□□□ -1.53
CCDC96Q2M329 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC96Q2M329 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms