Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC007620.3-201ENST00000608131 497 ntBASIC4.37□□□□□ -1.71
CDH17Q12864 AC007546.1-201ENST00000619452 559 ntBASIC4.37□□□□□ -1.71
CDH17Q12864 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH17Q12864 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH17Q12864 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDH17Q12864 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH17Q12864 PHKBP1-201ENST00000450951 1951 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CDH17Q12864 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH17Q12864 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH17Q12864 AL132640.2-201ENST00000559968 1698 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CDH17Q12864 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH17Q12864 MIR331-201ENST00000362302 94 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH17Q12864 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH17Q12864 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDH17Q12864 RPL23AP59-201ENST00000399415 461 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH17Q12864 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH17Q12864 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
CDH17Q12864 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH17Q12864 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AL161631.1-201ENST00000417933 486 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 OR6K4P-201ENST00000423179 955 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH17Q12864 RPL12P46-201ENST00000436610 195 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 HLA-N-201ENST00000437516 135 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH17Q12864 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH17Q12864 AL162388.1-201ENST00000450912 352 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AC133473.1-201ENST00000455173 299 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH17Q12864 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AC108145.1-201ENST00000503770 153 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AK3P4-201ENST00000504283 583 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH17Q12864 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH17Q12864 RNU6-319P-201ENST00000516025 108 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 SNORD116-30-201ENST00000516468 85 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH17Q12864 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH17Q12864 NPM1P35-201ENST00000533043 868 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AL109766.1-201ENST00000555080 552 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH17Q12864 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH17Q12864 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH17Q12864 AC123786.2-201ENST00000603459 275 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AC119501.1-201ENST00000603646 475 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AC113403.1-201ENST00000604910 193 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AC034236.3-201ENST00000605999 461 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AC090948.2-201ENST00000607363 564 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AL031666.3-201ENST00000609320 1006 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 AC004948.1-201ENST00000609858 672 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 MIR7703-201ENST00000620784 77 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH17Q12864 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH17Q12864 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
CDH17Q12864 AC068254.2-201ENST00000623938 3577 ntBASIC4.36□□□□□ -1.71
CDH17Q12864 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CDH17Q12864 AC007342.7-201ENST00000624610 2337 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH17Q12864 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CDH17Q12864 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH17Q12864 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDH17Q12864 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH17Q12864 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH17Q12864 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CDH17Q12864 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
CDH17Q12864 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH17Q12864 NOL8P1-201ENST00000508336 3529 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH17Q12864 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH17Q12864 RNU6-984P-201ENST00000363236 109 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 RNA5SP505-201ENST00000364748 108 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 MIR937-201ENST00000401271 86 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH17Q12864 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH17Q12864 AL138878.2-201ENST00000440581 1241 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH17Q12864 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH17Q12864 FGF7P3-201ENST00000454645 303 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 MTND2P28-201ENST00000457540 1044 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH17Q12864 AC104164.2-201ENST00000496953 495 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 AC010374.1-201ENST00000503762 1237 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH17Q12864 IGLVIV-65-201ENST00000517313 360 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.35□□□□□ -1.71
CDH17Q12864 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH17Q12864 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
CDH17Q12864 AC006064.5-201ENST00000541782 248 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 AC124068.1-201ENST00000563131 678 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CDH17Q12864 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.35□□□□□ -1.71
CDH17Q12864 AC020915.5-201ENST00000596836 964 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 AC090948.1-201ENST00000607464 549 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 AP005212.4-201ENST00000614206 710 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 AC140479.6-201ENST00000633535 357 ntBASIC4.35□□□□□ -1.71
CDH17Q12864 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms