Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ZNF849P-201ENST00000594711 1566 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 OR4K17-201ENST00000315543 1032 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN1BQ07699 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 DNAJC19P6-201ENST00000401853 280 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AL121834.1-202ENST00000404494 277 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN1BQ07699 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 NUP35P2-201ENST00000416748 943 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 SLC35E1P1-201ENST00000419313 864 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 RPS12P23-201ENST00000419579 400 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AC007394.1-201ENST00000421941 531 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AC241520.1-201ENST00000422654 1099 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 PDSS1P1-201ENST00000422953 1114 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AP001324.1-201ENST00000428553 399 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 NPM1P34-201ENST00000428821 893 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 RPL21P110-201ENST00000433345 446 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCN1BQ07699 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.41□□□□□ -1.7
SCN1BQ07699 MYO5BP2-201ENST00000449815 1277 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 IGHV5-78-201ENST00000450948 295 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 RN7SL41P-201ENST00000476144 297 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN1BQ07699 EIF1P7-201ENST00000487533 337 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 RN7SL441P-201ENST00000492388 296 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN1BQ07699 HMGN1P15-201ENST00000513870 295 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AC012400.1-201ENST00000518452 381 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 IGJP1-201ENST00000522682 475 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN1BQ07699 OR5M2P-201ENST00000529003 936 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 SERPINE4P-201ENST00000554978 281 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN1BQ07699 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SCN1BQ07699 VN1R88P-201ENST00000596787 292 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AP003117.2-201ENST00000606010 545 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AC099669.2-201ENST00000616549 437 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AC004232.3-201ENST00000622977 525 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.41□□□□□ -1.7
SCN1BQ07699 AL109659.3-201ENST00000624985 950 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 CYP4F35P-202ENST00000636121 390 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
SCN1BQ07699 XPOTP1-201ENST00000443317 2398 ntBASIC4.41□□□□□ -1.7
SCN1BQ07699 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCN1BQ07699 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN1BQ07699 MTCO1P6-201ENST00000481192 1384 ntBASIC4.4□□□□□ -1.7
SCN1BQ07699 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCN1BQ07699 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCN1BQ07699 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCN1BQ07699 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
SCN1BQ07699 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCN1BQ07699 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCN1BQ07699 AC008549.2-201ENST00000333482 706 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCN1BQ07699 RNU1-20P-201ENST00000363314 162 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 RNU1-83P-201ENST00000363426 164 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCN1BQ07699 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCN1BQ07699 RNU6-468P-201ENST00000384003 109 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN1BQ07699 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.4□□□□□ -1.71
SCN1BQ07699 RNU6-77P-201ENST00000410554 91 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.4□□□□□ -1.71
SCN1BQ07699 EIF4EP1-201ENST00000422311 642 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.4□□□□□ -1.71
SCN1BQ07699 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN1BQ07699 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.4□□□□□ -1.71
SCN1BQ07699 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN1BQ07699 OR52E7P-201ENST00000452394 933 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.4□□□□□ -1.71
SCN1BQ07699 AC026348.1-201ENST00000462549 1053 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 RPS20P21-201ENST00000466859 343 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AC015908.1-201ENST00000478739 476 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 HPRT1P2-201ENST00000505250 544 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 NAMPTP2-201ENST00000505629 1115 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN1BQ07699 RNU5A-7P-201ENST00000515979 116 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN1BQ07699 AF279873.1-201ENST00000523393 313 ntBASIC4.4□□□□□ -1.71
SCN1BQ07699 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms