Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LSM6P62312 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LSM6P62312 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LSM6P62312 RNU1-15P-201ENST00000353977 144 ntBASIC3.87□□□□□ -1.79
LSM6P62312 RNVU1-6-201ENST00000364688 164 ntBASIC3.87□□□□□ -1.79
LSM6P62312 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.87□□□□□ -1.79
LSM6P62312 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LSM6P62312 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LSM6P62312 VN1R8P-201ENST00000407739 893 ntBASIC3.87□□□□□ -1.79
LSM6P62312 RPS20P14-201ENST00000412545 360 ntBASIC3.87□□□□□ -1.79
LSM6P62312 RAC1P3-201ENST00000416129 580 ntBASIC3.87□□□□□ -1.79
LSM6P62312 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.87□□□□□ -1.79
LSM6P62312 AL353748.1-201ENST00000440753 474 ntBASIC3.87□□□□□ -1.79
LSM6P62312 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.87□□□□□ -1.79
LSM6P62312 RPL7P33-201ENST00000444159 742 ntBASIC3.87□□□□□ -1.79
LSM6P62312 RPL35AP28-201ENST00000459730 331 ntBASIC3.87□□□□□ -1.79
LSM6P62312 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.87□□□□□ -1.79
LSM6P62312 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LSM6P62312 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.87□□□□□ -1.79
LSM6P62312 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.87□□□□□ -1.79
LSM6P62312 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.87□□□□□ -1.79
LSM6P62312 PHBP17-201ENST00000528576 541 ntBASIC3.87□□□□□ -1.79
LSM6P62312 AP006289.1-201ENST00000538089 277 ntBASIC3.87□□□□□ -1.79
LSM6P62312 AC234775.3-201ENST00000564612 656 ntBASIC3.87□□□□□ -1.79
LSM6P62312 AL121834.1-201ENST00000572284 509 ntBASIC3.87□□□□□ -1.79
LSM6P62312 AC023509.5-201ENST00000617434 807 ntBASIC3.87□□□□□ -1.79
LSM6P62312 AC074276.2-201ENST00000619891 348 ntBASIC3.87□□□□□ -1.79
LSM6P62312 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LSM6P62312 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LSM6P62312 AC010300.1-201ENST00000600671 5134 ntBASIC3.87□□□□□ -1.79
LSM6P62312 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LSM6P62312 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.87□□□□□ -1.79
LSM6P62312 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LSM6P62312 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LSM6P62312 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
LSM6P62312 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.86□□□□□ -1.79
LSM6P62312 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.86□□□□□ -1.79
LSM6P62312 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LSM6P62312 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LSM6P62312 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.86□□□□□ -1.79
LSM6P62312 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LSM6P62312 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.86□□□□□ -1.79
LSM6P62312 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LSM6P62312 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LSM6P62312 AC067945.1-201ENST00000342609 618 ntBASIC3.86□□□□□ -1.79
LSM6P62312 RNU6-225P-201ENST00000384613 103 ntBASIC3.86□□□□□ -1.79
LSM6P62312 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.86□□□□□ -1.79
LSM6P62312 AL590139.1-201ENST00000416267 400 ntBASIC3.86□□□□□ -1.79
LSM6P62312 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.86□□□□□ -1.79
LSM6P62312 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.86□□□□□ -1.79
LSM6P62312 RPL7AP25-201ENST00000423357 805 ntBASIC3.86□□□□□ -1.79
LSM6P62312 RBMY1KP-201ENST00000423480 476 ntBASIC3.86□□□□□ -1.79
LSM6P62312 EIF1P3-201ENST00000423841 334 ntBASIC3.86□□□□□ -1.79
LSM6P62312 BX119904.1-201ENST00000432026 348 ntBASIC3.86□□□□□ -1.79
LSM6P62312 ARL2BPP10-201ENST00000446487 531 ntBASIC3.86□□□□□ -1.79
LSM6P62312 AL451050.1-201ENST00000450126 415 ntBASIC3.86□□□□□ -1.79
LSM6P62312 RPL7P31-201ENST00000450192 724 ntBASIC3.86□□□□□ -1.79
LSM6P62312 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.86□□□□□ -1.79
LSM6P62312 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.86□□□□□ -1.79
LSM6P62312 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.86□□□□□ -1.79
LSM6P62312 ATP1B1P1-201ENST00000509767 915 ntBASIC3.86□□□□□ -1.79
LSM6P62312 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.86□□□□□ -1.79
LSM6P62312 NPM1P35-201ENST00000533043 868 ntBASIC3.86□□□□□ -1.79
LSM6P62312 AC063949.1-201ENST00000552900 865 ntBASIC3.86□□□□□ -1.79
LSM6P62312 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.86□□□□□ -1.79
LSM6P62312 MIR4716-201ENST00000579628 84 ntBASIC3.86□□□□□ -1.79
LSM6P62312 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.86□□□□□ -1.79
LSM6P62312 AC005034.4-201ENST00000603612 899 ntBASIC3.86□□□□□ -1.79
LSM6P62312 AC024940.4-201ENST00000605507 246 ntBASIC3.86□□□□□ -1.79
LSM6P62312 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.86□□□□□ -1.79
LSM6P62312 AC019278.1-201ENST00000623516 479 ntBASIC3.86□□□□□ -1.79
LSM6P62312 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LSM6P62312 AC093311.1-201ENST00000506586 2021 ntBASIC3.86□□□□□ -1.79
LSM6P62312 NOL8P1-201ENST00000508336 3529 ntBASIC3.86□□□□□ -1.79
LSM6P62312 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LSM6P62312 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
LSM6P62312 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LSM6P62312 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LSM6P62312 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LSM6P62312 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LSM6P62312 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM6P62312 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.85□□□□□ -1.79
LSM6P62312 RAD17P1-201ENST00000418130 2042 ntBASIC3.85□□□□□ -1.79
LSM6P62312 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.85□□□□□ -1.79
LSM6P62312 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM6P62312 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LSM6P62312 RHOT1P2-201ENST00000366423 333 ntBASIC3.85□□□□□ -1.79
LSM6P62312 RPS16P5-201ENST00000406501 404 ntBASIC3.85□□□□□ -1.79
LSM6P62312 MIR1911-201ENST00000410783 80 ntBASIC3.85□□□□□ -1.79
LSM6P62312 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.85□□□□□ -1.79
LSM6P62312 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.85□□□□□ -1.79
LSM6P62312 AC244033.1-201ENST00000426826 870 ntBASIC3.85□□□□□ -1.79
LSM6P62312 AC073069.1-201ENST00000428657 441 ntBASIC3.85□□□□□ -1.79
LSM6P62312 DYNLL1P7-201ENST00000429273 258 ntBASIC3.85□□□□□ -1.79
LSM6P62312 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.85□□□□□ -1.79
LSM6P62312 VN1R96P-201ENST00000446052 858 ntBASIC3.85□□□□□ -1.79
LSM6P62312 ABCF2P2-201ENST00000450549 296 ntBASIC3.85□□□□□ -1.79
LSM6P62312 DHFRP3-201ENST00000455595 559 ntBASIC3.85□□□□□ -1.79
LSM6P62312 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.85□□□□□ -1.79
LSM6P62312 RN7SL354P-201ENST00000469282 294 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms