Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.52□□□□□ -1.69
SEC61A1P61619 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.52□□□□□ -1.69
SEC61A1P61619 SS18L2P2-201ENST00000583960 235 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.52□□□□□ -1.69
SEC61A1P61619 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.52□□□□□ -1.69
SEC61A1P61619 AC110760.3-201ENST00000598794 467 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.52□□□□□ -1.69
SEC61A1P61619 AC124856.1-201ENST00000600819 896 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 AC009027.1-201ENST00000604510 479 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 TUSC7.1-201ENST00000610969 165 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 AC009090.3-201ENST00000616553 565 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 AC009318.3-201ENST00000616916 503 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 AL121890.3-201ENST00000618494 516 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 MIR6839-201ENST00000620425 113 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.52□□□□□ -1.69
SEC61A1P61619 AC099654.6-201ENST00000636487 512 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
SEC61A1P61619 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SEC61A1P61619 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.52□□□□□ -1.69
SEC61A1P61619 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.52□□□□□ -1.69
SEC61A1P61619 AL133268.1-201ENST00000405676 1401 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 MTCO1P18-201ENST00000455518 1419 ntBASIC4.52□□□□□ -1.69
SEC61A1P61619 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A1P61619 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SEC61A1P61619 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.52□□□□□ -1.69
SEC61A1P61619 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A1P61619 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
SEC61A1P61619 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A1P61619 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SEC61A1P61619 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A1P61619 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A1P61619 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SEC61A1P61619 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A1P61619 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A1P61619 U3.2-201ENST00000362981 210 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 RNA5SP27-201ENST00000363839 119 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
SEC61A1P61619 DBIP1-201ENST00000401435 260 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A1P61619 HNRNPDP2-201ENST00000406475 478 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A1P61619 RN7SKP16-201ENST00000410180 299 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 RNA5SP296-201ENST00000410523 111 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 HMGB3P31-201ENST00000413333 595 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 LINC01881-201ENST00000416103 412 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A1P61619 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A1P61619 RAC1P8-201ENST00000427086 527 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A1P61619 LYPLA1P1-201ENST00000434514 622 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AP000936.3-201ENST00000438127 255 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 FGF7P5-201ENST00000441829 291 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A1P61619 HMGB3P6-201ENST00000444896 598 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 CASP3P1-201ENST00000446037 609 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A1P61619 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A1P61619 MYO5BP2-201ENST00000449815 1277 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 DNAJB5P1-201ENST00000454004 806 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A1P61619 RPL7P39-201ENST00000481157 744 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 RN7SL447P-201ENST00000494711 245 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 RPL15P21-201ENST00000495592 567 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC072052.1-201ENST00000496556 306 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A1P61619 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A1P61619 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A1P61619 RNU6-941P-201ENST00000516346 108 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A1P61619 MTCO1P47-201ENST00000523889 1271 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A1P61619 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AC023050.2-201ENST00000544968 387 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC008083.2-201ENST00000546707 476 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AL049779.2-201ENST00000553847 315 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 OR11H3P-201ENST00000554547 982 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC004825.1-201ENST00000555068 586 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A1P61619 RPL10P14-201ENST00000565265 298 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AC013468.1-201ENST00000608680 598 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AL445423.1-201ENST00000609941 536 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms