Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPCS3P61009 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.67□□□□□ -1.82
SPCS3P61009 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPCS3P61009 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SPCS3P61009 RNA5SP151-201ENST00000365632 117 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPCS3P61009 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPCS3P61009 RNU1-89P-201ENST00000384592 164 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 RN7SKP56-201ENST00000410513 331 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 AC093162.1-201ENST00000419682 124 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 CHEK2P5-201ENST00000423877 246 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.67□□□□□ -1.82
SPCS3P61009 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.67□□□□□ -1.82
SPCS3P61009 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.67□□□□□ -1.82
SPCS3P61009 MTND2P25-201ENST00000449028 610 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 VN1R32P-201ENST00000452234 905 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 AC096741.1-201ENST00000472250 846 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPCS3P61009 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.67□□□□□ -1.82
SPCS3P61009 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.67□□□□□ -1.82
SPCS3P61009 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.67□□□□□ -1.82
SPCS3P61009 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.67□□□□□ -1.82
SPCS3P61009 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SPCS3P61009 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SPCS3P61009 OR10G5P-201ENST00000532733 358 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 GCSHP4-201ENST00000538792 439 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.67□□□□□ -1.82
SPCS3P61009 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.67□□□□□ -1.82
SPCS3P61009 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.67□□□□□ -1.82
SPCS3P61009 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.67□□□□□ -1.82
SPCS3P61009 MIR5047-201ENST00000579212 100 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.67□□□□□ -1.82
SPCS3P61009 AC011487.3-201ENST00000593607 453 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 AC087763.1-201ENST00000603391 286 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 AC007423.1-201ENST00000605009 627 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 AP002360.3-201ENST00000607673 710 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 AC016252.1-201ENST00000609721 474 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 AC112694.2-201ENST00000623697 768 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPCS3P61009 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
SPCS3P61009 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPCS3P61009 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SPCS3P61009 OTUD4P1-201ENST00000237841 3067 ntBASIC3.67□□□□□ -1.82
SPCS3P61009 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.66□□□□□ -1.82
SPCS3P61009 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.66□□□□□ -1.82
SPCS3P61009 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPCS3P61009 NXPH1-205ENST00000602349 1953 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SPCS3P61009 RNU4-4P-201ENST00000364588 130 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 RNU1-63P-201ENST00000383902 164 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 RNU1-106P-201ENST00000384382 164 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 PTMAP5-201ENST00000393073 333 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPCS3P61009 AC140479.3-201ENST00000418944 1126 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPCS3P61009 AC073335.1-201ENST00000427776 363 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 AC007559.1-201ENST00000428736 355 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 AC097523.2-201ENST00000435551 652 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 OR1H1P-201ENST00000448731 937 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 AC073850.1-201ENST00000449243 255 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 CFTRP1-201ENST00000456646 183 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 TMED11P-201ENST00000479478 690 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 RPL36AP41-201ENST00000493820 306 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SPCS3P61009 HAUS1P1-201ENST00000505275 832 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.66□□□□□ -1.82
SPCS3P61009 AC015795.1-201ENST00000513669 327 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.66□□□□□ -1.82
SPCS3P61009 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.66□□□□□ -1.82
SPCS3P61009 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.66□□□□□ -1.82
SPCS3P61009 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SPCS3P61009 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.66□□□□□ -1.82
SPCS3P61009 MIR3691-201ENST00000578066 90 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.66□□□□□ -1.82
SPCS3P61009 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.66□□□□□ -1.82
SPCS3P61009 SNX6P1-201ENST00000601728 1224 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.66□□□□□ -1.82
SPCS3P61009 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.66□□□□□ -1.82
SPCS3P61009 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.66□□□□□ -1.82
SPCS3P61009 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SPCS3P61009 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPCS3P61009 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPCS3P61009 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.66□□□□□ -1.82
SPCS3P61009 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SPCS3P61009 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPCS3P61009 RPS4XP5-202ENST00000449995 1334 ntBASIC3.66□□□□□ -1.82
SPCS3P61009 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPCS3P61009 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPCS3P61009 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPCS3P61009 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.66□□□□□ -1.82
SPCS3P61009 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
SPCS3P61009 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
SPCS3P61009 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.65□□□□□ -1.82
SPCS3P61009 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.65□□□□□ -1.82
SPCS3P61009 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.65□□□□□ -1.83
SPCS3P61009 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SPCS3P61009 AC067945.1-201ENST00000342609 618 ntBASIC3.65□□□□□ -1.83
SPCS3P61009 U8.4-201ENST00000363626 134 ntBASIC3.65□□□□□ -1.83
SPCS3P61009 RNU6-304P-201ENST00000364855 107 ntBASIC3.65□□□□□ -1.83
SPCS3P61009 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms