Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CIR1P3-201ENST00000405137 479 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.57□□□□□ -1.52
GFRA1P56159 MIR1305-201ENST00000408300 86 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.57□□□□□ -1.52
GFRA1P56159 RN7SKP266-201ENST00000410232 287 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 RNA5SP156-201ENST00000410250 110 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AL121878.1-201ENST00000418638 859 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.57□□□□□ -1.52
GFRA1P56159 NPM1P34-201ENST00000428821 893 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AC000111.3-201ENST00000433478 193 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 MTND4LP10-201ENST00000435146 291 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.57□□□□□ -1.52
GFRA1P56159 ARPC3P5-201ENST00000448802 534 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AC103563.5-201ENST00000455643 364 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.57□□□□□ -1.52
GFRA1P56159 OR6K1P-201ENST00000456766 971 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 MTCO3P2-201ENST00000457365 171 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AC068228.1-201ENST00000461723 211 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.57□□□□□ -1.52
GFRA1P56159 FTH1P8-201ENST00000498161 514 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 LSM3P4-201ENST00000502948 309 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AC022447.3-201ENST00000506865 495 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA1P56159 RNU6-347P-201ENST00000516658 105 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.57□□□□□ -1.52
GFRA1P56159 OR5M2P-201ENST00000529003 936 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.57□□□□□ -1.52
GFRA1P56159 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.57□□□□□ -1.52
GFRA1P56159 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.57□□□□□ -1.52
GFRA1P56159 EIF5A2P1-201ENST00000564027 460 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA1P56159 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.57□□□□□ -1.52
GFRA1P56159 AP001180.3-201ENST00000582221 145 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.57□□□□□ -1.52
GFRA1P56159 AC022916.3-201ENST00000592961 742 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AC068768.2-201ENST00000602352 343 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.57□□□□□ -1.52
GFRA1P56159 AC008555.7-201ENST00000605008 583 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AC092681.3-201ENST00000609463 678 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AL592295.2-201ENST00000612578 206 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 RFPL4AP6-201ENST00000616792 846 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.57□□□□□ -1.52
GFRA1P56159 AC074140.1-201ENST00000621617 208 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 AC124864.2-201ENST00000624736 186 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 MIR1910-201ENST00000636955 80 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
GFRA1P56159 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
GFRA1P56159 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
GFRA1P56159 BRAFP1-201ENST00000445336 2703 ntBASIC5.57□□□□□ -1.52
GFRA1P56159 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
GFRA1P56159 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
GFRA1P56159 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
GFRA1P56159 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GFRA1P56159 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
GFRA1P56159 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.56□□□□□ -1.52
GFRA1P56159 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 AP001541.1-201ENST00000623322 1904 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AC119674.1-213ENST00000641177 1386 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 AC022325.1-201ENST00000502748 2199 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.56□□□□□ -1.52
GFRA1P56159 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.56□□□□□ -1.52
GFRA1P56159 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 TTC41P-205ENST00000551270 3963 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 OR11H5P-202ENST00000641612 1325 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.56□□□□□ -1.52
GFRA1P56159 AL034370.1-201ENST00000397254 1590 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.56□□□□□ -1.52
GFRA1P56159 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GFRA1P56159 DOCK11P1-201ENST00000553480 5932 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AC092692.1-201ENST00000623625 2595 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
GFRA1P56159 Y_RNA.9-201ENST00000362354 101 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 RN7SKP275-201ENST00000364626 301 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
GFRA1P56159 SNORA77.2-201ENST00000408571 112 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 RN7SKP240-201ENST00000410583 375 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 RN7SKP161-201ENST00000411110 305 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.56□□□□□ -1.52
GFRA1P56159 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.56□□□□□ -1.52
GFRA1P56159 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.56□□□□□ -1.52
GFRA1P56159 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.56□□□□□ -1.52
GFRA1P56159 AC110602.1-201ENST00000437414 318 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AL353662.1-201ENST00000439099 327 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 RABEPKP1-201ENST00000440529 1026 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 MTND4P25-201ENST00000441039 533 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.56□□□□□ -1.52
GFRA1P56159 AL022237.1-201ENST00000446663 358 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.56□□□□□ -1.52
GFRA1P56159 Z99127.3-201ENST00000448158 395 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.56□□□□□ -1.52
GFRA1P56159 PPIAP27-201ENST00000453800 265 ntBASIC5.56□□□□□ -1.52
GFRA1P56159 RPS27AP3-201ENST00000453803 454 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms