Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.81□□□□□ -1.64
CLCNKAP51800 MORF4L1P3-201ENST00000525966 950 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLCNKAP51800 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.81□□□□□ -1.64
CLCNKAP51800 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 AC119501.1-201ENST00000603646 475 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 AL031320.1-201ENST00000604177 357 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCNKAP51800 AP004607.9-201ENST00000618202 316 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 AC097520.1-201ENST00000624435 385 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCNKAP51800 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLCNKAP51800 SMG1P4-204ENST00000523028 4131 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 ASNSP1-201ENST00000518311 1939 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 SAMMSON-226ENST00000642089 1582 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCNKAP51800 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLCNKAP51800 AC013442.1-201ENST00000397347 228 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AL357515.1-201ENST00000402967 542 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 RPS26P47-201ENST00000427219 348 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.8□□□□□ -1.64
CLCNKAP51800 AC008072.1-201ENST00000434254 824 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 TMX2P1-201ENST00000436507 708 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCNKAP51800 CACYBPP1-201ENST00000438592 684 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCNKAP51800 AC000111.2-201ENST00000448200 210 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AL009048.1-201ENST00000450437 298 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCNKAP51800 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCNKAP51800 RPL21P6-201ENST00000479171 504 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCNKAP51800 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCNKAP51800 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCNKAP51800 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCNKAP51800 CDH12P4-201ENST00000517835 295 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 CDH12P3-201ENST00000517935 295 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 CDH12P1-201ENST00000518435 295 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCNKAP51800 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCNKAP51800 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCNKAP51800 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCNKAP51800 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCNKAP51800 AC010735.1-201ENST00000567305 1026 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AGGF1P5-201ENST00000567900 919 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 MIR4509-3-201ENST00000578671 94 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 MIR4509-2-201ENST00000583920 94 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 RN7SL622P-201ENST00000585292 275 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 MTCO2P2-201ENST00000591258 225 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCNKAP51800 AC011453.2-201ENST00000603737 729 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AC013244.3-201ENST00000605614 388 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCNKAP51800 AC007497.1-201ENST00000610421 561 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AC116447.1-201ENST00000613153 453 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 MIR4509-1-201ENST00000618224 94 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AC109809.1-201ENST00000619665 545 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AL078595.3-201ENST00000623815 1166 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AP000648.2-201ENST00000624182 404 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCNKAP51800 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCNKAP51800 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CLCNKAP51800 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCNKAP51800 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCNKAP51800 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCNKAP51800 AL022393.1-201ENST00000625142 1677 ntBASIC4.8□□□□□ -1.64
CLCNKAP51800 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLCNKAP51800 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCNKAP51800 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCNKAP51800 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCNKAP51800 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLCNKAP51800 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLCNKAP51800 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCNKAP51800 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLCNKAP51800 MAPK10-349ENST00000641767 3661 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCNKAP51800 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.79□□□□□ -1.64
CLCNKAP51800 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLCNKAP51800 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCNKAP51800 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCNKAP51800 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLCNKAP51800 RN7SKP100-201ENST00000411258 284 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms