Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.64□□□□□ -1.35
USP11P51784 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.64□□□□□ -1.35
USP11P51784 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.64□□□□□ -1.35
USP11P51784 OR52B5P-202ENST00000641118 1110 ntBASIC6.64□□□□□ -1.35
USP11P51784 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
USP11P51784 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USP11P51784 AL161756.3-201ENST00000641216 2071 ntBASIC6.64□□□□□ -1.35
USP11P51784 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.64□□□□□ -1.35
USP11P51784 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USP11P51784 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
USP11P51784 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.63□□□□□ -1.35
USP11P51784 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USP11P51784 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.63□□□□□ -1.35
USP11P51784 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.63□□□□□ -1.35
USP11P51784 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USP11P51784 OR52B3P-201ENST00000314715 928 ntBASIC6.63□□□□□ -1.35
USP11P51784 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USP11P51784 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USP11P51784 RNU6-692P-201ENST00000384496 107 ntBASIC6.63□□□□□ -1.35
USP11P51784 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
USP11P51784 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.63□□□□□ -1.35
USP11P51784 RPS26P13-201ENST00000419030 330 ntBASIC6.63□□□□□ -1.35
USP11P51784 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.63□□□□□ -1.35
USP11P51784 AC234064.1-201ENST00000436312 247 ntBASIC6.63□□□□□ -1.35
USP11P51784 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.63□□□□□ -1.35
USP11P51784 RPL7P36-201ENST00000444633 681 ntBASIC6.63□□□□□ -1.35
USP11P51784 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.63□□□□□ -1.35
USP11P51784 RFC5P1-201ENST00000454419 874 ntBASIC6.63□□□□□ -1.35
USP11P51784 RNU1-88P-201ENST00000459274 128 ntBASIC6.63□□□□□ -1.35
USP11P51784 RPL30P9-201ENST00000465586 330 ntBASIC6.63□□□□□ -1.35
USP11P51784 AC013828.1-201ENST00000481845 158 ntBASIC6.63□□□□□ -1.35
USP11P51784 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.63□□□□□ -1.35
USP11P51784 RPS7P6-201ENST00000485777 579 ntBASIC6.63□□□□□ -1.35
USP11P51784 RPS4XP15-201ENST00000489210 795 ntBASIC6.63□□□□□ -1.35
USP11P51784 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.63□□□□□ -1.35
USP11P51784 MTCYBP17-201ENST00000503579 789 ntBASIC6.63□□□□□ -1.35
USP11P51784 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.63□□□□□ -1.35
USP11P51784 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.63□□□□□ -1.35
USP11P51784 AC078899.1-201ENST00000521432 1185 ntBASIC6.63□□□□□ -1.35
USP11P51784 AP002001.2-201ENST00000529025 1469 ntBASIC6.63□□□□□ -1.35
USP11P51784 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.63□□□□□ -1.35
USP11P51784 AC090424.1-201ENST00000535243 736 ntBASIC6.63□□□□□ -1.35
USP11P51784 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.63□□□□□ -1.35
USP11P51784 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.63□□□□□ -1.35
USP11P51784 AC006960.3-201ENST00000561845 705 ntBASIC6.63□□□□□ -1.35
USP11P51784 ATP5F1P7-201ENST00000567330 760 ntBASIC6.63□□□□□ -1.35
USP11P51784 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.63□□□□□ -1.35
USP11P51784 MIR4260-201ENST00000583107 67 ntBASIC6.63□□□□□ -1.35
USP11P51784 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.63□□□□□ -1.35
USP11P51784 UBE2V2P2-201ENST00000587677 504 ntBASIC6.63□□□□□ -1.35
USP11P51784 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.63□□□□□ -1.35
USP11P51784 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
USP11P51784 AC027243.2-201ENST00000602530 724 ntBASIC6.63□□□□□ -1.35
USP11P51784 SEPT7P9-203ENST00000604116 343 ntBASIC6.63□□□□□ -1.35
USP11P51784 AC091834.1-201ENST00000614543 472 ntBASIC6.63□□□□□ -1.35
USP11P51784 AC009159.1-201ENST00000618386 642 ntBASIC6.63□□□□□ -1.35
USP11P51784 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USP11P51784 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.63□□□□□ -1.35
USP11P51784 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USP11P51784 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
USP11P51784 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
USP11P51784 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USP11P51784 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
USP11P51784 AL161912.4-201ENST00000623889 2468 ntBASIC6.62□□□□□ -1.35
USP11P51784 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.62□□□□□ -1.35
USP11P51784 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.62□□□□□ -1.35
USP11P51784 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
USP11P51784 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USP11P51784 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
USP11P51784 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
USP11P51784 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
USP11P51784 AC117409.1-201ENST00000470499 1310 ntBASIC6.62□□□□□ -1.35
USP11P51784 AC109315.1-201ENST00000584143 1347 ntBASIC6.62□□□□□ -1.35
USP11P51784 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USP11P51784 Y_RNA.9-201ENST00000362354 101 ntBASIC6.62□□□□□ -1.35
USP11P51784 RNU6-621P-201ENST00000364752 109 ntBASIC6.62□□□□□ -1.35
USP11P51784 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USP11P51784 MIR142-201ENST00000384835 87 ntBASIC6.62□□□□□ -1.35
USP11P51784 CYCSP45-201ENST00000402289 315 ntBASIC6.62□□□□□ -1.35
USP11P51784 RN7SKP56-201ENST00000410513 331 ntBASIC6.62□□□□□ -1.35
USP11P51784 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 AC233728.2-201ENST00000425348 757 ntBASIC6.62□□□□□ -1.35
USP11P51784 AC104843.2-201ENST00000427666 297 ntBASIC6.62□□□□□ -1.35
USP11P51784 RPS3AP38-201ENST00000435889 763 ntBASIC6.62□□□□□ -1.35
USP11P51784 AC015983.1-201ENST00000441577 373 ntBASIC6.62□□□□□ -1.35
USP11P51784 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.62□□□□□ -1.35
USP11P51784 AC097499.1-201ENST00000444277 208 ntBASIC6.62□□□□□ -1.35
USP11P51784 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.62□□□□□ -1.35
USP11P51784 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 HMGB1P16-201ENST00000447155 540 ntBASIC6.62□□□□□ -1.35
USP11P51784 MTND1P18-201ENST00000448191 573 ntBASIC6.62□□□□□ -1.35
USP11P51784 MTND6P5-201ENST00000448266 512 ntBASIC6.62□□□□□ -1.35
USP11P51784 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms