Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 OR10R1P-201ENST00000441524 1141 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-1P43699 USP9YP17-201ENST00000444617 696 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 AC005002.1-201ENST00000447458 540 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 RPS3AP53-201ENST00000454716 778 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 RNU7-140P-201ENST00000459546 60 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX2-1P43699 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-1P43699 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-1P43699 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-1P43699 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-1P43699 AC008837.1-201ENST00000511513 412 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.13□□□□□ -1.75
NKX2-1P43699 AC026407.1-201ENST00000518369 204 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-1P43699 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-1P43699 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-1P43699 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.13□□□□□ -1.75
NKX2-1P43699 AC010547.6-201ENST00000571789 193 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 NF1P5-201ENST00000588287 448 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 AC005377.1-201ENST00000605126 456 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 RNU4-5P-201ENST00000607255 135 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NKX2-1P43699 AL138478.1-201ENST00000612252 832 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 AL353726.1-201ENST00000614041 1000 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 Z99129.2-201ENST00000619967 314 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 AC006963.1-201ENST00000624003 1052 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 MIR1910-201ENST00000636955 80 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
NKX2-1P43699 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NKX2-1P43699 AC235565.1-201ENST00000456962 1325 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.13□□□□□ -1.75
NKX2-1P43699 AC007529.1-201ENST00000418574 2178 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
NKX2-1P43699 AL672167.1-205ENST00000641112 3080 ntBASIC4.13□□□□□ -1.75
NKX2-1P43699 CASC19-206ENST00000641028 1430 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NKX2-1P43699 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-1P43699 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NKX2-1P43699 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 MIR133B-201ENST00000362210 119 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 RNA5SP510-201ENST00000364697 99 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 RNU4-28P-201ENST00000364739 141 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 RNA5SP122-201ENST00000384457 108 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 OR4K12P-201ENST00000406538 961 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AL592310.1-201ENST00000414330 671 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AL358176.3-201ENST00000420757 454 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 CKS1BP6-201ENST00000424932 240 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AL009174.1-201ENST00000426577 416 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-1P43699 RPS20P1-201ENST00000434853 354 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 MTND6P18-201ENST00000439477 513 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 UBE2V1P5-201ENST00000440070 405 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX2-1P43699 MRPL48P1-201ENST00000445390 636 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 EEF1B2P6-201ENST00000445713 673 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-1P43699 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 OR52E7P-201ENST00000452394 933 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 MRPL35P4-201ENST00000453682 566 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AC108751.2-201ENST00000469993 231 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AC010683.1-201ENST00000473673 378 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AC007998.1-201ENST00000474156 672 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AC091959.2-201ENST00000477363 321 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AC134050.1-201ENST00000495088 933 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AC020699.1-201ENST00000505161 445 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AC114322.1-201ENST00000506771 926 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AC008885.2-201ENST00000509506 930 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-1P43699 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 SNORA19.3-201ENST00000516165 130 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NKX2-1P43699 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-1P43699 IGJP1-201ENST00000522682 475 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.12□□□□□ -1.75
NKX2-1P43699 HMGB1P40-201ENST00000525121 540 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 OR4A2P-201ENST00000527276 913 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 NDUFS5P6-201ENST00000529136 295 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-1P43699 MTCO1P40-201ENST00000574371 625 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 MTATP6P24-201ENST00000576835 677 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-1P43699 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.12□□□□□ -1.75
NKX2-1P43699 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX2-1P43699 Z82195.1-201ENST00000604558 398 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 VN1R74P-201ENST00000613259 503 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AC015804.1-201ENST00000622935 435 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms