Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.83□□□□□ -1.64
SSR1P43307 AC018635.1-201ENST00000468292 1030 ntBASIC4.83□□□□□ -1.64
SSR1P43307 AC011037.1-201ENST00000483964 558 ntBASIC4.83□□□□□ -1.64
SSR1P43307 NDUFB5P1-201ENST00000508134 564 ntBASIC4.83□□□□□ -1.64
SSR1P43307 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.83□□□□□ -1.64
SSR1P43307 RNA5SP73-201ENST00000516744 108 ntBASIC4.83□□□□□ -1.64
SSR1P43307 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.83□□□□□ -1.64
SSR1P43307 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.83□□□□□ -1.64
SSR1P43307 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SSR1P43307 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.83□□□□□ -1.64
SSR1P43307 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.83□□□□□ -1.64
SSR1P43307 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.83□□□□□ -1.64
SSR1P43307 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.83□□□□□ -1.64
SSR1P43307 ATP5J2P6-201ENST00000565203 266 ntBASIC4.83□□□□□ -1.64
SSR1P43307 AC138473.1-201ENST00000605717 526 ntBASIC4.83□□□□□ -1.64
SSR1P43307 AC211433.2-201ENST00000608433 387 ntBASIC4.83□□□□□ -1.64
SSR1P43307 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSR1P43307 U3.53-201ENST00000628922 216 ntBASIC4.83□□□□□ -1.64
SSR1P43307 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSR1P43307 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.82□□□□□ -1.64
SSR1P43307 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 AP001002.1-201ENST00000625148 1513 ntBASIC4.82□□□□□ -1.64
SSR1P43307 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.82□□□□□ -1.64
SSR1P43307 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.82□□□□□ -1.64
SSR1P43307 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSR1P43307 RNU6-697P-201ENST00000363348 107 ntBASIC4.82□□□□□ -1.64
SSR1P43307 RNU6-304P-201ENST00000364855 107 ntBASIC4.82□□□□□ -1.64
SSR1P43307 MIR195-201ENST00000385194 87 ntBASIC4.82□□□□□ -1.64
SSR1P43307 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 AC104837.2-201ENST00000427236 424 ntBASIC4.82□□□□□ -1.64
SSR1P43307 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 RPL23AP25-201ENST00000430973 463 ntBASIC4.82□□□□□ -1.64
SSR1P43307 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.82□□□□□ -1.64
SSR1P43307 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 PA2G4P6-201ENST00000438325 1197 ntBASIC4.82□□□□□ -1.64
SSR1P43307 AL353093.1-201ENST00000441292 436 ntBASIC4.82□□□□□ -1.64
SSR1P43307 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.82□□□□□ -1.64
SSR1P43307 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.82□□□□□ -1.64
SSR1P43307 AP000926.3-201ENST00000497201 299 ntBASIC4.82□□□□□ -1.64
SSR1P43307 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.82□□□□□ -1.64
SSR1P43307 NDUFB4P9-201ENST00000511646 388 ntBASIC4.82□□□□□ -1.64
SSR1P43307 RNU6-347P-201ENST00000516658 105 ntBASIC4.82□□□□□ -1.64
SSR1P43307 AP000676.2-201ENST00000529711 301 ntBASIC4.82□□□□□ -1.64
SSR1P43307 NPM1P35-201ENST00000533043 868 ntBASIC4.82□□□□□ -1.64
SSR1P43307 CYCSP28-201ENST00000534284 321 ntBASIC4.82□□□□□ -1.64
SSR1P43307 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.82□□□□□ -1.64
SSR1P43307 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 AC084033.1-201ENST00000550830 633 ntBASIC4.82□□□□□ -1.64
SSR1P43307 AC016180.1-201ENST00000567945 403 ntBASIC4.82□□□□□ -1.64
SSR1P43307 MTND6P33-201ENST00000571794 183 ntBASIC4.82□□□□□ -1.64
SSR1P43307 PSMA6P4-201ENST00000603247 718 ntBASIC4.82□□□□□ -1.64
SSR1P43307 ABI1P1-201ENST00000603375 1120 ntBASIC4.82□□□□□ -1.64
SSR1P43307 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.82□□□□□ -1.64
SSR1P43307 MIR7155-201ENST00000615925 56 ntBASIC4.82□□□□□ -1.64
SSR1P43307 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.82□□□□□ -1.64
SSR1P43307 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.82□□□□□ -1.64
SSR1P43307 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.82□□□□□ -1.64
SSR1P43307 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SSR1P43307 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SSR1P43307 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.82□□□□□ -1.64
SSR1P43307 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SSR1P43307 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.82□□□□□ -1.64
SSR1P43307 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.82□□□□□ -1.64
SSR1P43307 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SSR1P43307 AC006971.1-201ENST00000407916 4486 ntBASIC4.82□□□□□ -1.64
SSR1P43307 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.81□□□□□ -1.64
SSR1P43307 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.81□□□□□ -1.64
SSR1P43307 MAPK10-372ENST00000641954 3413 ntBASIC4.81□□□□□ -1.64
SSR1P43307 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.81□□□□□ -1.64
SSR1P43307 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSR1P43307 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSR1P43307 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSR1P43307 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SSR1P43307 MIR105-2-201ENST00000385083 81 ntBASIC4.81□□□□□ -1.64
SSR1P43307 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.81□□□□□ -1.64
SSR1P43307 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.81□□□□□ -1.64
SSR1P43307 AC008072.1-201ENST00000434254 824 ntBASIC4.81□□□□□ -1.64
SSR1P43307 AC005154.2-201ENST00000438110 379 ntBASIC4.81□□□□□ -1.64
SSR1P43307 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.81□□□□□ -1.64
SSR1P43307 RPS3AP53-201ENST00000454716 778 ntBASIC4.81□□□□□ -1.64
SSR1P43307 RPS3AP41-201ENST00000462701 778 ntBASIC4.81□□□□□ -1.64
SSR1P43307 AP001922.4-201ENST00000526967 290 ntBASIC4.81□□□□□ -1.64
SSR1P43307 AC107016.1-201ENST00000550463 337 ntBASIC4.81□□□□□ -1.64
SSR1P43307 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.81□□□□□ -1.64
SSR1P43307 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.81□□□□□ -1.64
SSR1P43307 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.81□□□□□ -1.64
SSR1P43307 ADAD1P2-201ENST00000588476 646 ntBASIC4.81□□□□□ -1.64
SSR1P43307 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSR1P43307 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.81□□□□□ -1.64
SSR1P43307 AC090181.2-201ENST00000602975 672 ntBASIC4.81□□□□□ -1.64
SSR1P43307 AC103792.1-201ENST00000603591 919 ntBASIC4.81□□□□□ -1.64
SSR1P43307 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.81□□□□□ -1.64
SSR1P43307 AC013244.1-201ENST00000604279 193 ntBASIC4.81□□□□□ -1.64
SSR1P43307 AC005084.1-201ENST00000605160 304 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms