Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL161729.3-201ENST00000603533 673 ntBASIC4.58□□□□□ -1.68
HOXA9P31269 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.58□□□□□ -1.68
HOXA9P31269 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA9P31269 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA9P31269 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXA9P31269 AL133243.3-201ENST00000617415 3004 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 AL672167.1-203ENST00000641299 2975 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA9P31269 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA9P31269 NXPH1-205ENST00000602349 1953 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HOXA9P31269 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.57□□□□□ -1.68
HOXA9P31269 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
HOXA9P31269 SNORA48.7-201ENST00000391302 135 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 SNORA74C-2-201ENST00000411179 201 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 RPL36AP36-201ENST00000418616 301 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA9P31269 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.57□□□□□ -1.68
HOXA9P31269 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXA9P31269 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA9P31269 UBE2V1P3-201ENST00000439651 417 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 AC099063.2-201ENST00000446360 662 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA9P31269 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA9P31269 AL132838.2-201ENST00000492041 314 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA9P31269 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA9P31269 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXA9P31269 RNA5SP360-201ENST00000516555 118 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA9P31269 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA9P31269 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.57□□□□□ -1.68
HOXA9P31269 AC090312.1-201ENST00000580637 348 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 AL021997.2-201ENST00000615674 271 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 SNX18P1Y-201ENST00000616231 511 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 AL161637.1-201ENST00000622380 412 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 AC112484.5-201ENST00000624189 228 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA9P31269 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA9P31269 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA9P31269 ASNSP1-204ENST00000641977 1664 ntBASIC4.57□□□□□ -1.68
HOXA9P31269 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA9P31269 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA9P31269 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA9P31269 ASNSP1-201ENST00000518311 1939 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA9P31269 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HOXA9P31269 RNU1-14P-201ENST00000362759 152 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 RNU1-83P-201ENST00000363426 164 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 RPL32P23-201ENST00000397237 405 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 AC025750.1-201ENST00000399891 379 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 RNU6-628P-201ENST00000410675 107 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 RN7SKP33-201ENST00000410942 340 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXA9P31269 AL356095.1-201ENST00000417217 199 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.56□□□□□ -1.68
HOXA9P31269 AL355994.1-201ENST00000424379 260 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 AL157831.1-201ENST00000426134 473 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.56□□□□□ -1.68
HOXA9P31269 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXA9P31269 AL138787.1-202ENST00000437804 898 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 RPL5P32-201ENST00000454085 879 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 APOOP2-201ENST00000461561 539 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 ARL4AP1-201ENST00000503220 705 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 AC113430.1-201ENST00000506872 718 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 SLC25A15P5-201ENST00000508033 253 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXA9P31269 ATP1B1P1-201ENST00000509767 915 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXA9P31269 AC099522.1-202ENST00000514718 367 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 RNA5SP73-201ENST00000516744 108 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 HMGB1P23-201ENST00000518743 568 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXA9P31269 OR5BC1P-201ENST00000529327 739 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA9P31269 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.56□□□□□ -1.68
HOXA9P31269 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXA9P31269 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXA9P31269 COX6CP4-201ENST00000605798 228 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 AC008966.2-201ENST00000606157 453 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 AC097505.1-201ENST00000610199 565 ntBASIC4.56□□□□□ -1.68
HOXA9P31269 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HOXA9P31269 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXA9P31269 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA9P31269 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA9P31269 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HOXA9P31269 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HOXA9P31269 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXA9P31269 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HOXA9P31269 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
HOXA9P31269 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXA9P31269 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HOXA9P31269 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXA9P31269 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
HOXA9P31269 RNA5SP175-201ENST00000364275 119 ntBASIC4.55□□□□□ -1.68
HOXA9P31269 SNORD96B-201ENST00000386148 79 ntBASIC4.55□□□□□ -1.68
HOXA9P31269 MT-RNR1-201ENST00000389680 954 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms