Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.27□□□□□ -1.89
CXCL1P09341 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CXCL1P09341 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL1P09341 DEFB109D-201ENST00000529497 240 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.27□□□□□ -1.89
CXCL1P09341 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL1P09341 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.27□□□□□ -1.89
CXCL1P09341 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL1P09341 EDDM3DP-201ENST00000554692 434 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.27□□□□□ -1.89
CXCL1P09341 AC015982.1-201ENST00000608113 465 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 AC004241.3-201ENST00000611728 517 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CXCL1P09341 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CXCL1P09341 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 AC009951.1-201ENST00000623674 2614 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 AC006504.1-201ENST00000562493 3666 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 ASNSP1-204ENST00000641977 1664 ntBASIC3.27□□□□□ -1.89
CXCL1P09341 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
CXCL1P09341 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL1P09341 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.26□□□□□ -1.89
CXCL1P09341 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CXCL1P09341 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CXCL1P09341 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL1P09341 RPL23P2-201ENST00000320371 421 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 RNA5SP305-201ENST00000362665 119 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 RNU1-106P-201ENST00000384382 164 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 MT-RNR1-201ENST00000389680 954 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 AC009237.5-201ENST00000414271 501 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 AC127526.1-201ENST00000417526 366 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 ARAFP1-201ENST00000422172 605 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.26□□□□□ -1.89
CXCL1P09341 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.26□□□□□ -1.89
CXCL1P09341 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL1P09341 AL049745.1-201ENST00000433953 286 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 UBE2V1P3-201ENST00000439651 417 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 AC114495.1-201ENST00000441274 436 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 OR52J1P-201ENST00000450596 932 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 OR52Y1P-201ENST00000452418 828 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 MTCO3P16-201ENST00000454456 754 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 RNU7-170P-201ENST00000459303 61 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 RPL7L1P8-201ENST00000469911 741 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL1P09341 RPL7P51-201ENST00000490532 749 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 RN7SL812P-201ENST00000493791 279 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
CXCL1P09341 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL1P09341 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
CXCL1P09341 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.26□□□□□ -1.89
CXCL1P09341 RNU2-30P-201ENST00000516209 141 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.26□□□□□ -1.89
CXCL1P09341 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL1P09341 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CXCL1P09341 AC008033.2-201ENST00000542626 177 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 CBX3P5-201ENST00000552017 521 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CXCL1P09341 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.26□□□□□ -1.89
CXCL1P09341 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.26□□□□□ -1.89
CXCL1P09341 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CXCL1P09341 MIR7702-201ENST00000621931 59 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 AP006248.2-201ENST00000623309 592 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 AP002799.1-201ENST00000623552 423 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 AC021106.3-201ENST00000623925 531 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL1P09341 AL773545.4-201ENST00000637262 310 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 AL513478.4-201ENST00000641636 310 ntBASIC3.26□□□□□ -1.89
CXCL1P09341 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL1P09341 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CXCL1P09341 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL1P09341 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL1P09341 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL1P09341 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL1P09341 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.25□□□□□ -1.89
CXCL1P09341 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CXCL1P09341 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL1P09341 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL1P09341 PRO1804-201ENST00000623780 2050 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 AC100871.1-201ENST00000507871 1456 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL1P09341 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL1P09341 U8.4-201ENST00000363626 134 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 RNU4-4P-201ENST00000364588 130 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 RNU6-1279P-201ENST00000383917 103 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 RNA5SP332-201ENST00000391063 115 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 RNA5SP113-201ENST00000410486 84 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 RN7SKP100-201ENST00000411258 284 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.25□□□□□ -1.89
CXCL1P09341 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.25□□□□□ -1.89
CXCL1P09341 OR2B7P-201ENST00000429302 934 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 MTND2P2-201ENST00000434633 945 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.25□□□□□ -1.89
CXCL1P09341 CLIC4P1-201ENST00000453177 535 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 AC010307.1-201ENST00000467206 836 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 MTND4LP2-201ENST00000502312 285 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms