Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SPTA1P02549 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC3.89□□□□□ -1.79
SPTA1P02549 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SPTA1P02549 AL133243.3-201ENST00000617415 3004 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SPTA1P02549 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SPTA1P02549 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC3.89□□□□□ -1.79
SPTA1P02549 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SPTA1P02549 Z74021.1-201ENST00000423610 407 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 RPL35AP21-201ENST00000437667 333 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.89□□□□□ -1.79
SPTA1P02549 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.89□□□□□ -1.79
SPTA1P02549 OR9M1P-201ENST00000459641 921 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 AP001486.1-201ENST00000463339 476 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 AC074250.1-201ENST00000511117 192 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.89□□□□□ -1.79
SPTA1P02549 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.89□□□□□ -1.79
SPTA1P02549 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.89□□□□□ -1.79
SPTA1P02549 AC091178.1-203ENST00000584586 279 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 PRELID3BP3-201ENST00000584963 545 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SPTA1P02549 MIR6500-201ENST00000622700 86 ntBASIC3.89□□□□□ -1.79
SPTA1P02549 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.88□□□□□ -1.79
SPTA1P02549 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 AC009229.4-201ENST00000623854 1947 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 MFSD8-236ENST00000641509 4050 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 MIR331-201ENST00000362302 94 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 SNORA48.2-201ENST00000390926 124 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.88□□□□□ -1.79
SPTA1P02549 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 AL139099.1-201ENST00000497398 403 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.88□□□□□ -1.79
SPTA1P02549 KCTD9P2-201ENST00000512203 1013 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 AC105031.1-201ENST00000518550 476 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.88□□□□□ -1.79
SPTA1P02549 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.88□□□□□ -1.79
SPTA1P02549 AGGF1P9-201ENST00000561884 913 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 AC020634.1-201ENST00000608701 549 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 AC007786.3-201ENST00000615154 596 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 AL596275.2-208ENST00000641192 594 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 EIF3EP2-201ENST00000423042 1814 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 AL603750.1-201ENST00000624216 1717 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 CASC19-261ENST00000641853 1638 ntBASIC3.88□□□□□ -1.79
SPTA1P02549 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC3.88□□□□□ -1.79
SPTA1P02549 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SPTA1P02549 CBX1P3-201ENST00000413296 527 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 AC115285.1-201ENST00000424879 736 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 OR5BE1P-201ENST00000425977 939 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.87□□□□□ -1.79
SPTA1P02549 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.87□□□□□ -1.79
SPTA1P02549 RNA5SP519-201ENST00000516480 119 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.87□□□□□ -1.79
SPTA1P02549 AC015804.1-201ENST00000622935 435 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 OR5BE1P-202ENST00000641168 1176 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.87□□□□□ -1.79
SPTA1P02549 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SPTA1P02549 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SPTA1P02549 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SPTA1P02549 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPTA1P02549 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC3.87□□□□□ -1.79
SPTA1P02549 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
SPTA1P02549 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPTA1P02549 VPS35P1-201ENST00000563400 1518 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPTA1P02549 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SPTA1P02549 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SPTA1P02549 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SPTA1P02549 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.87□□□□□ -1.79
SPTA1P02549 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SPTA1P02549 RNU1-14P-201ENST00000362759 152 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.87□□□□□ -1.79
SPTA1P02549 RPL7P28-201ENST00000437739 740 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.87□□□□□ -1.79
SPTA1P02549 AC010374.1-201ENST00000503762 1237 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SPTA1P02549 IFITM8P-201ENST00000522529 394 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 AC105233.3-201ENST00000531125 744 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.87□□□□□ -1.79
SPTA1P02549 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.87□□□□□ -1.79
SPTA1P02549 MIR5685-201ENST00000579080 79 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.87□□□□□ -1.79
SPTA1P02549 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.87□□□□□ -1.79
SPTA1P02549 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPTA1P02549 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SPTA1P02549 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SPTA1P02549 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms