Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL1A1P02452 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL1A1P02452 USP9YP4-201ENST00000424401 1745 ntBASIC5.01□□□□□ -1.61
COL1A1P02452 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL1A1P02452 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL1A1P02452 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL1A1P02452 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL1A1P02452 AL672167.2-201ENST00000377164 879 ntBASIC5□□□□□ -1.61
COL1A1P02452 HSPE1P12-201ENST00000412576 301 ntBASIC5□□□□□ -1.61
COL1A1P02452 AL691449.1-201ENST00000426570 421 ntBASIC5□□□□□ -1.61
COL1A1P02452 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5□□□□□ -1.61
COL1A1P02452 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL1A1P02452 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL1A1P02452 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5□□□□□ -1.61
COL1A1P02452 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
COL1A1P02452 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL1A1P02452 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5□□□□□ -1.61
COL1A1P02452 DSTNP2-201ENST00000504533 515 ntBASIC5□□□□□ -1.61
COL1A1P02452 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5□□□□□ -1.61
COL1A1P02452 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5□□□□□ -1.61
COL1A1P02452 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5□□□□□ -1.61
COL1A1P02452 RNU6-352P-201ENST00000516908 107 ntBASIC5□□□□□ -1.61
COL1A1P02452 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5□□□□□ -1.61
COL1A1P02452 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL1A1P02452 HNRNPCP4-201ENST00000571636 900 ntBASIC5□□□□□ -1.61
COL1A1P02452 MIR5685-201ENST00000579080 79 ntBASIC5□□□□□ -1.61
COL1A1P02452 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5□□□□□ -1.61
COL1A1P02452 AC024220.1-201ENST00000603675 484 ntBASIC5□□□□□ -1.61
COL1A1P02452 MIR6500-201ENST00000622700 86 ntBASIC5□□□□□ -1.61
COL1A1P02452 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5□□□□□ -1.61
COL1A1P02452 OFD1P5Y-201ENST00000447585 2590 ntBASIC5□□□□□ -1.61
COL1A1P02452 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5□□□□□ -1.61
COL1A1P02452 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL1A1P02452 AP001273.1-201ENST00000624493 3152 ntBASIC5□□□□□ -1.61
COL1A1P02452 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL1A1P02452 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL1A1P02452 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL1A1P02452 SNORA63.1-201ENST00000362493 131 ntBASIC5□□□□□ -1.61
COL1A1P02452 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5□□□□□ -1.61
COL1A1P02452 SEPT7P8-201ENST00000413308 775 ntBASIC5□□□□□ -1.61
COL1A1P02452 SKP1P3-201ENST00000429280 487 ntBASIC5□□□□□ -1.61
COL1A1P02452 GCA-203ENST00000429691 824 ntTSL 3 BASIC5□□□□□ -1.61
COL1A1P02452 PRELID3BP10-201ENST00000431957 584 ntBASIC5□□□□□ -1.61
COL1A1P02452 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5□□□□□ -1.61
COL1A1P02452 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5□□□□□ -1.61
COL1A1P02452 RPS4XP4-201ENST00000443195 763 ntBASIC5□□□□□ -1.61
COL1A1P02452 FTH1P25-201ENST00000447665 469 ntBASIC5□□□□□ -1.61
COL1A1P02452 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5□□□□□ -1.61
COL1A1P02452 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5□□□□□ -1.61
COL1A1P02452 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5□□□□□ -1.61
COL1A1P02452 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5□□□□□ -1.61
COL1A1P02452 AC112230.1-201ENST00000604342 547 ntBASIC5□□□□□ -1.61
COL1A1P02452 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5□□□□□ -1.61
COL1A1P02452 AC099669.2-201ENST00000616549 437 ntBASIC5□□□□□ -1.61
COL1A1P02452 AC023509.5-201ENST00000617434 807 ntBASIC5□□□□□ -1.61
COL1A1P02452 AL356121.2-201ENST00000624715 780 ntBASIC5□□□□□ -1.61
COL1A1P02452 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5□□□□□ -1.61
COL1A1P02452 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5□□□□□ -1.61
COL1A1P02452 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
COL1A1P02452 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL1A1P02452 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL1A1P02452 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL1A1P02452 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
COL1A1P02452 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.99□□□□□ -1.61
COL1A1P02452 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL1A1P02452 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.99□□□□□ -1.61
COL1A1P02452 AC069157.1-201ENST00000421749 137 ntBASIC4.99□□□□□ -1.61
COL1A1P02452 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.99□□□□□ -1.61
COL1A1P02452 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.99□□□□□ -1.61
COL1A1P02452 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.99□□□□□ -1.61
COL1A1P02452 RPS11P1-201ENST00000451072 473 ntBASIC4.99□□□□□ -1.61
COL1A1P02452 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL1A1P02452 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.99□□□□□ -1.61
COL1A1P02452 AC100770.1-201ENST00000532310 322 ntBASIC4.99□□□□□ -1.61
COL1A1P02452 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.99□□□□□ -1.61
COL1A1P02452 AC010487.1-201ENST00000594408 1172 ntBASIC4.99□□□□□ -1.61
COL1A1P02452 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.99□□□□□ -1.61
COL1A1P02452 AL138721.1-201ENST00000616756 179 ntBASIC4.99□□□□□ -1.61
COL1A1P02452 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.99□□□□□ -1.61
COL1A1P02452 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.99□□□□□ -1.61
COL1A1P02452 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.99□□□□□ -1.61
COL1A1P02452 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
COL1A1P02452 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
COL1A1P02452 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL1A1P02452 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.99□□□□□ -1.61
COL1A1P02452 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
COL1A1P02452 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.98□□□□□ -1.61
COL1A1P02452 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL1A1P02452 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
COL1A1P02452 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL1A1P02452 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL1A1P02452 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.98□□□□□ -1.61
COL1A1P02452 AL121839.2-201ENST00000565058 6943 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 ERCC6-202ENST00000374127 1782 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
COL1A1P02452 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL1A1P02452 AC067945.1-201ENST00000342609 618 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 RNA5SP124-201ENST00000362739 110 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.98□□□□□ -1.61
COL1A1P02452 AC008280.1-201ENST00000418851 412 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms