Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TNFP01375 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TNFP01375 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
TNFP01375 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFP01375 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TNFP01375 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFP01375 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TNFP01375 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFP01375 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFP01375 RLIMP1-201ENST00000339626 1680 ntBASIC4.1□□□□□ -1.75
TNFP01375 AC126323.6-202ENST00000568092 3511 ntBASIC4.1□□□□□ -1.75
TNFP01375 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFP01375 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFP01375 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFP01375 RNA5SP513-201ENST00000364648 118 ntBASIC4.1□□□□□ -1.75
TNFP01375 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFP01375 RNU11-4P-201ENST00000391149 133 ntBASIC4.1□□□□□ -1.75
TNFP01375 RPL21P65-201ENST00000406094 466 ntBASIC4.1□□□□□ -1.75
TNFP01375 AP000357.1-201ENST00000409926 1165 ntBASIC4.1□□□□□ -1.75
TNFP01375 AL158073.1-201ENST00000426848 1104 ntBASIC4.1□□□□□ -1.75
TNFP01375 AC073335.1-201ENST00000427776 363 ntBASIC4.1□□□□□ -1.75
TNFP01375 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.1□□□□□ -1.75
TNFP01375 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFP01375 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.1□□□□□ -1.75
TNFP01375 RPL38P1-201ENST00000460914 211 ntBASIC4.1□□□□□ -1.75
TNFP01375 ARL4AP1-201ENST00000503220 705 ntBASIC4.1□□□□□ -1.75
TNFP01375 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TNFP01375 PGBD4P4-201ENST00000509673 613 ntBASIC4.1□□□□□ -1.75
TNFP01375 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.1□□□□□ -1.75
TNFP01375 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.1□□□□□ -1.75
TNFP01375 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.1□□□□□ -1.75
TNFP01375 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.1□□□□□ -1.75
TNFP01375 AC106785.1-201ENST00000565935 262 ntBASIC4.1□□□□□ -1.75
TNFP01375 AC022655.2-201ENST00000577280 318 ntBASIC4.1□□□□□ -1.75
TNFP01375 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.1□□□□□ -1.75
TNFP01375 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.1□□□□□ -1.75
TNFP01375 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TNFP01375 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFP01375 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFP01375 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
TNFP01375 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
TNFP01375 CASC19-255ENST00000641733 1385 ntBASIC4.1□□□□□ -1.75
TNFP01375 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFP01375 AL513548.1-201ENST00000562904 1724 ntBASIC4.09□□□□□ -1.75
TNFP01375 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TNFP01375 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TNFP01375 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
TNFP01375 AL592182.3-201ENST00000642132 3304 ntBASIC4.09□□□□□ -1.75
TNFP01375 SNORA37-201ENST00000384504 129 ntBASIC4.09□□□□□ -1.75
TNFP01375 AL445189.1-201ENST00000405722 338 ntBASIC4.09□□□□□ -1.75
TNFP01375 SEPT7P8-201ENST00000413308 775 ntBASIC4.09□□□□□ -1.75
TNFP01375 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFP01375 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.09□□□□□ -1.75
TNFP01375 SERPINA7P1-201ENST00000443077 631 ntBASIC4.09□□□□□ -1.75
TNFP01375 RPL21P89-201ENST00000444021 467 ntBASIC4.09□□□□□ -1.75
TNFP01375 FCF1P7-201ENST00000451185 558 ntBASIC4.09□□□□□ -1.75
TNFP01375 AC022795.1-201ENST00000473808 480 ntBASIC4.09□□□□□ -1.75
TNFP01375 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TNFP01375 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
TNFP01375 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFP01375 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.09□□□□□ -1.75
TNFP01375 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFP01375 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.09□□□□□ -1.75
TNFP01375 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.09□□□□□ -1.75
TNFP01375 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFP01375 SLC25A36P1-201ENST00000590111 465 ntBASIC4.09□□□□□ -1.75
TNFP01375 AC022916.3-201ENST00000592961 742 ntBASIC4.09□□□□□ -1.75
TNFP01375 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.09□□□□□ -1.75
TNFP01375 AL109618.2-201ENST00000605527 211 ntBASIC4.09□□□□□ -1.75
TNFP01375 AC099676.1-201ENST00000608886 657 ntBASIC4.09□□□□□ -1.75
TNFP01375 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
TNFP01375 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
TNFP01375 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TNFP01375 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TNFP01375 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
TNFP01375 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
TNFP01375 MAPK10-349ENST00000641767 3661 ntBASIC4.08□□□□□ -1.76
TNFP01375 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.08□□□□□ -1.76
TNFP01375 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TNFP01375 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.08□□□□□ -1.76
TNFP01375 SNORA11-201ENST00000408789 128 ntBASIC4.08□□□□□ -1.76
TNFP01375 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TNFP01375 OR8G2P-201ENST00000412796 908 ntBASIC4.08□□□□□ -1.76
TNFP01375 USP9YP4-201ENST00000424401 1745 ntBASIC4.08□□□□□ -1.76
TNFP01375 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.08□□□□□ -1.76
TNFP01375 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.08□□□□□ -1.76
TNFP01375 AL356276.2-201ENST00000435919 558 ntBASIC4.08□□□□□ -1.76
TNFP01375 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFP01375 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.08□□□□□ -1.76
TNFP01375 CDC27P1-201ENST00000445384 715 ntBASIC4.08□□□□□ -1.76
TNFP01375 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.08□□□□□ -1.76
TNFP01375 PSMC1P13-201ENST00000458195 985 ntBASIC4.08□□□□□ -1.76
TNFP01375 RPL7P1-201ENST00000468161 747 ntBASIC4.08□□□□□ -1.76
TNFP01375 RPL7P9-201ENST00000468715 747 ntBASIC4.08□□□□□ -1.76
TNFP01375 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TNFP01375 RN7SL132P-201ENST00000478131 296 ntBASIC4.08□□□□□ -1.76
TNFP01375 BNIP3P41-201ENST00000503774 571 ntBASIC4.08□□□□□ -1.76
TNFP01375 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.08□□□□□ -1.76
TNFP01375 AC108064.1-201ENST00000513791 460 ntBASIC4.08□□□□□ -1.76
TNFP01375 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms