Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.74□□□□□ -1.65
CTDNEP1O95476 RFPL4AP5-201ENST00000514977 504 ntBASIC4.74□□□□□ -1.65
CTDNEP1O95476 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTDNEP1O95476 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.74□□□□□ -1.65
CTDNEP1O95476 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.74□□□□□ -1.65
CTDNEP1O95476 AC022968.1-201ENST00000567372 442 ntBASIC4.74□□□□□ -1.65
CTDNEP1O95476 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.74□□□□□ -1.65
CTDNEP1O95476 AL139041.1-201ENST00000605480 610 ntBASIC4.74□□□□□ -1.65
CTDNEP1O95476 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.74□□□□□ -1.65
CTDNEP1O95476 TMEM30CP-203ENST00000637814 1035 ntBASIC4.74□□□□□ -1.65
CTDNEP1O95476 OR52H1-202ENST00000641796 1061 ntBASIC4.74□□□□□ -1.65
CTDNEP1O95476 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTDNEP1O95476 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTDNEP1O95476 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 OR6C69P-201ENST00000394268 893 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 FAR2P2-201ENST00000413041 594 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 AL590806.1-201ENST00000415818 853 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 COX6CP15-201ENST00000426313 211 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC016712.1-201ENST00000431088 378 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 RPL5P30-201ENST00000465511 891 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC139783.2-201ENST00000504847 1145 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC112184.1-201ENST00000505179 312 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC106806.2-201ENST00000509365 500 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 IGHV3-63-201ENST00000518422 341 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC069366.1-201ENST00000583159 838 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 ARF4P1-201ENST00000605447 541 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC005962.2-201ENST00000611427 652 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC015722.2-201ENST00000622210 551 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC006840.1-201ENST00000623069 542 ntBASIC4.73□□□□□ -1.65
CTDNEP1O95476 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.73□□□□□ -1.65
CTDNEP1O95476 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTDNEP1O95476 AC027228.2-201ENST00000567141 2154 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 AL929601.4-201ENST00000613011 1341 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTDNEP1O95476 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTDNEP1O95476 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTDNEP1O95476 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTDNEP1O95476 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 MIR448-201ENST00000362131 111 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTDNEP1O95476 SNORA11B-201ENST00000408175 129 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 TPT1P2-201ENST00000413105 503 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 BX119904.1-201ENST00000432026 348 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 TPTE2P3-201ENST00000441562 1189 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 HMGB3P22-202ENST00000451823 572 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 AC006463.2-201ENST00000473326 348 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 RPS26P15-201ENST00000488067 348 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 RN7SL604P-201ENST00000492589 296 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 MYL12AP1-201ENST00000518490 515 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 AC025884.1-201ENST00000556034 378 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 AC104662.1-201ENST00000604448 511 ntBASIC4.72□□□□□ -1.65
CTDNEP1O95476 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTDNEP1O95476 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CTDNEP1O95476 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTDNEP1O95476 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTDNEP1O95476 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTDNEP1O95476 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CTDNEP1O95476 AC005261.4-201ENST00000600047 1385 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTDNEP1O95476 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CTDNEP1O95476 AL035696.2-201ENST00000407941 709 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CTDNEP1O95476 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.71□□□□□ -1.66
CTDNEP1O95476 FAR2P4-202ENST00000425399 584 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.71□□□□□ -1.66
CTDNEP1O95476 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.71□□□□□ -1.66
CTDNEP1O95476 TBCAP1-201ENST00000436520 327 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.71□□□□□ -1.66
CTDNEP1O95476 RPS4XP4-201ENST00000443195 763 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.71□□□□□ -1.66
CTDNEP1O95476 NUTF2P3-201ENST00000448540 384 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.71□□□□□ -1.66
CTDNEP1O95476 RPL7P1-201ENST00000468161 747 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms