Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC7.31□□□□□ -1.24
CUX2O14529 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC7.31□□□□□ -1.24
CUX2O14529 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC7.31□□□□□ -1.24
CUX2O14529 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUX2O14529 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC7.3□□□□□ -1.24
CUX2O14529 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUX2O14529 RPS7P15-201ENST00000415804 584 ntBASIC7.3□□□□□ -1.24
CUX2O14529 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUX2O14529 AC012671.1-201ENST00000451912 203 ntBASIC7.3□□□□□ -1.24
CUX2O14529 RNA5SP73-201ENST00000516744 108 ntBASIC7.3□□□□□ -1.24
CUX2O14529 OR8I1P-201ENST00000529291 931 ntBASIC7.3□□□□□ -1.24
CUX2O14529 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC7.3□□□□□ -1.24
CUX2O14529 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC7.3□□□□□ -1.24
CUX2O14529 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC7.3□□□□□ -1.24
CUX2O14529 CASC19-206ENST00000641028 1430 ntBASIC7.3□□□□□ -1.24
CUX2O14529 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUX2O14529 AC074029.4-201ENST00000624796 1859 ntBASIC7.3□□□□□ -1.24
CUX2O14529 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUX2O14529 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC7.3□□□□□ -1.24
CUX2O14529 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUX2O14529 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUX2O14529 AL022393.1-201ENST00000625142 1677 ntBASIC7.3□□□□□ -1.24
CUX2O14529 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CUX2O14529 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CUX2O14529 AL358178.1-201ENST00000407698 397 ntBASIC7.3□□□□□ -1.24
CUX2O14529 ARAFP1-201ENST00000422172 605 ntBASIC7.3□□□□□ -1.24
CUX2O14529 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC7.3□□□□□ -1.24
CUX2O14529 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.3□□□□□ -1.24
CUX2O14529 RN7SL601P-201ENST00000471221 293 ntBASIC7.3□□□□□ -1.24
CUX2O14529 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC7.3□□□□□ -1.24
CUX2O14529 AC069306.1-201ENST00000507006 843 ntBASIC7.3□□□□□ -1.24
CUX2O14529 AC130352.1-201ENST00000602979 661 ntBASIC7.3□□□□□ -1.24
CUX2O14529 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.3□□□□□ -1.24
CUX2O14529 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.3□□□□□ -1.24
CUX2O14529 TEX41-280ENST00000629185 591 ntTSL 5 BASIC7.3□□□□□ -1.24
CUX2O14529 AC104623.2-202ENST00000623477 4002 ntBASIC7.29□□□□□ -1.24
CUX2O14529 AC083837.1-201ENST00000565297 2994 ntBASIC7.29□□□□□ -1.24
CUX2O14529 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.29□□□□□ -1.24
CUX2O14529 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUX2O14529 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUX2O14529 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CUX2O14529 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUX2O14529 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC7.29□□□□□ -1.24
CUX2O14529 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CUX2O14529 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUX2O14529 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CUX2O14529 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CUX2O14529 USP9YP4-201ENST00000424401 1745 ntBASIC7.29□□□□□ -1.24
CUX2O14529 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUX2O14529 Z74021.1-201ENST00000423610 407 ntBASIC7.29□□□□□ -1.24
CUX2O14529 ZDHHC20P2-201ENST00000424108 429 ntBASIC7.29□□□□□ -1.24
CUX2O14529 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC7.29□□□□□ -1.24
CUX2O14529 ADAD1P2-201ENST00000588476 646 ntBASIC7.29□□□□□ -1.24
CUX2O14529 AC079880.2-201ENST00000603790 1213 ntBASIC7.29□□□□□ -1.24
CUX2O14529 AL031666.3-201ENST00000609320 1006 ntBASIC7.29□□□□□ -1.24
CUX2O14529 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CUX2O14529 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CUX2O14529 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CUX2O14529 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUX2O14529 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
CUX2O14529 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CUX2O14529 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
CUX2O14529 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CUX2O14529 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CUX2O14529 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUX2O14529 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
CUX2O14529 ACEA_U3.1-201ENST00000363057 217 ntBASIC7.28□□□□□ -1.24
CUX2O14529 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.28□□□□□ -1.24
CUX2O14529 RN7SL812P-201ENST00000493791 279 ntBASIC7.28□□□□□ -1.24
CUX2O14529 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC7.28□□□□□ -1.24
CUX2O14529 PTS-202ENST00000524931 696 ntTSL 3 BASIC7.28□□□□□ -1.24
CUX2O14529 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CUX2O14529 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC7.28□□□□□ -1.24
CUX2O14529 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC7.28□□□□□ -1.24
CUX2O14529 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.28□□□□□ -1.24
CUX2O14529 AC010653.1-201ENST00000571108 881 ntBASIC7.28□□□□□ -1.24
CUX2O14529 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUX2O14529 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.28□□□□□ -1.24
CUX2O14529 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUX2O14529 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC7.28□□□□□ -1.24
CUX2O14529 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CUX2O14529 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUX2O14529 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CUX2O14529 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CUX2O14529 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUX2O14529 AL355852.1-201ENST00000454081 1771 ntBASIC7.27□□□□□ -1.25
CUX2O14529 AC092111.2-201ENST00000611627 1414 ntBASIC7.27□□□□□ -1.25
CUX2O14529 AC083899.2-201ENST00000423285 1376 ntBASIC7.27□□□□□ -1.25
CUX2O14529 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CUX2O14529 AL031121.1-201ENST00000406553 254 ntBASIC7.27□□□□□ -1.25
CUX2O14529 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.27□□□□□ -1.25
CUX2O14529 UBE2V1P3-201ENST00000439651 417 ntBASIC7.27□□□□□ -1.25
CUX2O14529 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.27□□□□□ -1.25
CUX2O14529 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC7.27□□□□□ -1.25
CUX2O14529 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC7.27□□□□□ -1.25
CUX2O14529 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.27□□□□□ -1.25
CUX2O14529 AC105074.1-201ENST00000623380 3095 ntBASIC7.27□□□□□ -1.25
CUX2O14529 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC7.27□□□□□ -1.25
CUX2O14529 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC7.27□□□□□ -1.25
CUX2O14529 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms