Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC28A1O00337 AC104763.1-201ENST00000475274 360 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 RPL36AP41-201ENST00000493820 306 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SLC28A1O00337 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SLC28A1O00337 AC113430.1-201ENST00000506872 718 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 STMN1P2-201ENST00000508435 439 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 AC025768.1-201ENST00000510057 267 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 SNORA76.2-201ENST00000517095 137 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC28A1O00337 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SLC28A1O00337 OR5AZ1P-201ENST00000527448 943 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 AP002812.4-201ENST00000532139 286 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SLC28A1O00337 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC28A1O00337 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.42□□□□□ -1.7
SLC28A1O00337 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SLC28A1O00337 AC125257.1-201ENST00000560400 2930 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 AC018618.2-201ENST00000604770 446 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 AL008729.2-201ENST00000606393 473 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 AC091979.2-201ENST00000607514 214 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC28A1O00337 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SLC28A1O00337 AL356094.1-201ENST00000624663 1212 ntBASIC4.42□□□□□ -1.7
SLC28A1O00337 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC28A1O00337 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.42□□□□□ -1.7
SLC28A1O00337 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.42□□□□□ -1.7
SLC28A1O00337 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC28A1O00337 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC28A1O00337 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SLC28A1O00337 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SLC28A1O00337 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SLC28A1O00337 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SLC28A1O00337 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
SLC28A1O00337 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SLC28A1O00337 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SLC28A1O00337 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC28A1O00337 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC28A1O00337 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SLC28A1O00337 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC28A1O00337 RNU6-252P-201ENST00000363232 107 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 RNU6-146P-201ENST00000384602 108 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC28A1O00337 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC28A1O00337 AC019050.1-201ENST00000418508 492 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 GTF2IP2-201ENST00000424290 697 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 RPL12P34-201ENST00000424532 479 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 MTND6P18-201ENST00000439477 513 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 SCARNA10-201ENST00000459255 330 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 RPL7AP6-201ENST00000477943 801 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 RPL7P16-201ENST00000479738 738 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 RN7SL629P-201ENST00000489622 285 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 RPL23AP73-201ENST00000492507 471 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC28A1O00337 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC28A1O00337 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC28A1O00337 RNU2-30P-201ENST00000516209 141 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 RN7SKP276-201ENST00000516242 268 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC28A1O00337 CIR1P1-201ENST00000524055 1133 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC28A1O00337 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SLC28A1O00337 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC28A1O00337 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC28A1O00337 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC28A1O00337 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC28A1O00337 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC28A1O00337 VN1R84P-201ENST00000593697 235 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 BNIP3P32-201ENST00000600015 554 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 AC079610.2-201ENST00000604818 690 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC28A1O00337 AC090948.2-201ENST00000607363 564 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 AP001033.2-201ENST00000609701 1003 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 MIR6862-1-201ENST00000613016 70 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC28A1O00337 MIR6862-2-201ENST00000614755 70 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 MIR6886-201ENST00000619864 61 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 U3.53-201ENST00000628922 216 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 AC055839.1-201ENST00000634467 498 ntBASIC4.41□□□□□ -1.7
SLC28A1O00337 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.41□□□□□ -1.7
SLC28A1O00337 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC28A1O00337 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC28A1O00337 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC28A1O00337 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC28A1O00337 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SLC28A1O00337 AC108467.2-201ENST00000617640 1597 ntBASIC4.4□□□□□ -1.7
SLC28A1O00337 RNF6P1-201ENST00000444889 1784 ntBASIC4.4□□□□□ -1.7
SLC28A1O00337 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.4□□□□□ -1.7
SLC28A1O00337 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.4□□□□□ -1.7
SLC28A1O00337 CR788268.1-201ENST00000603931 1809 ntBASIC4.4□□□□□ -1.7
SLC28A1O00337 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
SLC28A1O00337 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC28A1O00337 RNA5SP191-201ENST00000362585 102 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 RN7SKP149-201ENST00000363008 344 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 RN7SKP269-201ENST00000365545 319 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 RNA5SP151-201ENST00000365632 117 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SLC28A1O00337 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms