Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 DDX6P1-205ENST00000441966 1436 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 AC008033.1-201ENST00000216407 1162 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 OR5P1P-201ENST00000299512 925 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 OR56B2P-201ENST00000317102 954 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 MIR137-201ENST00000385223 102 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 SNORD65-201ENST00000391079 73 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 RNA5SP105-201ENST00000391123 113 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 FAR1P1-201ENST00000427163 934 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 MTND4LP7-201ENST00000431728 294 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 ACTR3P2-201ENST00000439585 1257 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 DHFRP3-201ENST00000455595 559 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 AP002345.1-201ENST00000456493 928 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 AL672167.3-201ENST00000465951 960 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 AC053481.1-201ENST00000467217 306 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 COL6A4P2-205ENST00000509855 506 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 HMGB1P19-201ENST00000517578 577 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 NPM1P6-201ENST00000521088 871 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 PSMB7P1-201ENST00000556349 514 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 BPIFA4P-203ENST00000603168 689 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 AL355802.4-201ENST00000607635 548 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 AC079298.2-201ENST00000623885 459 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 AP003497.2-201ENST00000624220 967 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 CFTRP2-201ENST00000634304 199 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 DHX9P1-201ENST00000436565 3076 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 AC139769.1-204ENST00000472297 1931 ntBASIC4.58□□□□□ -1.68
NEDD8-MDP1E9PL57 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 RNU1-83P-201ENST00000363426 164 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 RN7SKP227-201ENST00000364445 330 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 RNU6-40P-201ENST00000384254 107 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 FCF1P5-201ENST00000406490 482 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC004975.1-201ENST00000428733 208 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 MTND4LP14-201ENST00000429447 288 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AL691517.1-201ENST00000440833 1235 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 NUTF2P3-201ENST00000448540 384 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC104629.2-201ENST00000468627 598 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AL161747.1-201ENST00000480068 358 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC108157.1-201ENST00000510511 539 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 RNA5SP497-201ENST00000516081 97 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 SNORA31.9-201ENST00000516429 84 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 BMS1P7-201ENST00000602440 1052 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC040174.2-201ENST00000602701 465 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AL133247.2-201ENST00000603236 482 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AL008729.2-201ENST00000606393 473 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC092653.1-201ENST00000608509 531 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC091948.2-201ENST00000636510 279 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AC093775.1-201ENST00000624154 1868 ntBASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NEDD8-MDP1E9PL57 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NEDD8-MDP1E9PL57 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.56□□□□□ -1.68
NEDD8-MDP1E9PL57 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NEDD8-MDP1E9PL57 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms