Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 AL031320.1-201ENST00000604177 357 ntBASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 MEMO1P5-201ENST00000604810 406 ntBASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 AC107952.2-201ENST00000606048 486 ntBASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 AC004908.3-201ENST00000610248 625 ntBASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 AC087385.3-201ENST00000620477 187 ntBASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 AC074140.1-201ENST00000621617 208 ntBASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 AC019226.2-201ENST00000625973 424 ntBASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.08□□□□□ -1.6
TBC1D3FA6NER0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 MAPK10-263ENST00000641052 4307 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 MTND4P13-201ENST00000402078 1023 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AL356320.2-201ENST00000417263 507 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 OR5M12P-201ENST00000423388 929 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 HIGD1AP12-201ENST00000427832 281 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AP001324.1-201ENST00000428553 399 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 EEF1A1P39-201ENST00000440791 250 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AL354714.3-201ENST00000447284 493 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AC005410.1-202ENST00000460347 485 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AC091959.2-201ENST00000477363 321 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 RN7SL814P-201ENST00000487715 300 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 RN7SL591P-201ENST00000496150 292 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 RNA5SP43-201ENST00000516559 110 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 MRPS36P3-201ENST00000519284 130 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 MTND2P38-201ENST00000522536 667 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AC124293.1-201ENST00000530034 493 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 CR383656.6-201ENST00000550518 394 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 MTND4P33-201ENST00000556706 766 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AC009712.1-201ENST00000564938 316 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 EIF1P6-201ENST00000600054 334 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 MTND3P19-201ENST00000603825 345 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AL583856.2-201ENST00000606298 543 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 Z99129.2-201ENST00000619967 314 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AC138965.3-201ENST00000623875 498 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 AC019072.1-201ENST00000604535 1551 ntBASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TBC1D3FA6NER0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 MTCO1P6-201ENST00000481192 1384 ntBASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 AC104446.1-201ENST00000613728 1321 ntBASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 OR1L6-202ENST00000373684 1044 ntBASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 RNU6-636P-201ENST00000384598 107 ntBASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 RAC1P8-201ENST00000427086 527 ntBASIC5.06□□□□□ -1.6
TBC1D3FA6NER0 USP9YP9-201ENST00000429406 715 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms