Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 NPM1P40-201ENST00000412758 733 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 COX6B1P1-201ENST00000415962 213 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 RPS3AP37-201ENST00000419176 745 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC023128.2-201ENST00000420880 1223 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AL513175.2-201ENST00000422071 443 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 USP9YP9-201ENST00000429406 715 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 PRPF38AP2-201ENST00000438179 851 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AL450263.2-201ENST00000439400 589 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 ARAFP2-201ENST00000440565 559 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 HSFY3P-201ENST00000444242 1191 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AL591363.1-201ENST00000450091 483 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 snoU13.20-201ENST00000459180 104 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AP000797.2-201ENST00000475768 606 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 RPL7AP10-201ENST00000481016 791 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC108043.1-201ENST00000512696 574 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC006427.1-201ENST00000514359 712 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 HIGD1AP5-201ENST00000529959 259 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 OR8G3P-201ENST00000533406 921 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 DUX4L52-201ENST00000549363 777 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 VN1R78P-201ENST00000597393 564 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC009237.13-201ENST00000603193 276 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AC005377.1-201ENST00000605126 456 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AL158062.1-201ENST00000619632 745 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AP001005.3-201ENST00000622049 129 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 BX649567.1-201ENST00000642071 1134 ntBASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSX2IPQ9Y2D8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC007996.1-201ENST00000620414 2821 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC012618.3-205ENST00000637896 1496 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 RNA5SP455-201ENST00000365190 119 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 SNORD116-12-201ENST00000384468 92 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 ATP5HP3-201ENST00000396994 486 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AL136310.1-201ENST00000404926 654 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 CTSL3P-202ENST00000412179 788 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 Z80107.2-201ENST00000445127 392 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC092685.1-201ENST00000447960 1243 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC112492.1-201ENST00000449607 712 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 NDUFA5P9-201ENST00000472609 340 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 BTG4P1-201ENST00000510421 183 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC125611.1-201ENST00000549563 229 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC233702.9-201ENST00000581528 203 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 MIR4472-2-201ENST00000582069 67 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 FAM106CP-201ENST00000582212 507 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC061975.8-201ENST00000587058 721 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC040904.1-201ENST00000590850 223 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC069304.3-201ENST00000603938 1084 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC013470.4-201ENST00000619978 986 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 AC068137.4-201ENST00000638485 296 ntBASIC5.54□□□□□ -1.52
SSX2IPQ9Y2D8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms