Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 PPIAP22-201ENST00000358455 498 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 RNU6-806P-201ENST00000365147 105 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 KRT18P52-201ENST00000404956 846 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 Y_RNA.793-201ENST00000411222 111 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 OR4F2P-201ENST00000424047 938 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC004383.1-201ENST00000438135 289 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 RPS7P5-201ENST00000441482 581 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 TRBVB-201ENST00000477100 408 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 RPL23AP41-201ENST00000484754 458 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 HSD3BP3-201ENST00000514706 994 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 SCARNA16.2-201ENST00000516520 172 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 RNA5SP503-201ENST00000517047 117 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 EEF1B2P2-201ENST00000519625 676 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC040926.1-201ENST00000530195 238 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 LSM3P2-201ENST00000551246 273 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 HSPE1P3-201ENST00000559254 309 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC138749.2-201ENST00000566048 167 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC022239.4-201ENST00000602626 504 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AL022238.3-201ENST00000609279 443 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 RN7SL680P-201ENST00000620379 299 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AC129908.1-201ENST00000624553 648 ntBASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
VPS9D1Q9Y2B5 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
VPS9D1Q9Y2B5 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
VPS9D1Q9Y2B5 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
VPS9D1Q9Y2B5 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
VPS9D1Q9Y2B5 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.46□□□□□ -1.21
VPS9D1Q9Y2B5 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.21
VPS9D1Q9Y2B5 AC130304.1-201ENST00000622942 2385 ntBASIC7.46□□□□□ -1.21
VPS9D1Q9Y2B5 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
VPS9D1Q9Y2B5 UG0898H09-202ENST00000623646 7040 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 RNU6-39P-201ENST00000384344 107 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 RNU2-51P-201ENST00000410708 197 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 USMG5P1-201ENST00000425964 177 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AC096632.1-201ENST00000427395 310 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 MTATP6P16-201ENST00000434543 526 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AC244505.2-201ENST00000435089 759 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 LIN28AP2-201ENST00000445283 458 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 RPL4P2-201ENST00000447259 1282 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 RPS23P9-201ENST00000448848 438 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AC108860.1-201ENST00000484521 383 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 RN7SL569P-201ENST00000494652 288 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 SNORA40.15-201ENST00000516884 107 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 PMS2P3-207ENST00000529061 717 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 FRG2IP-201ENST00000563581 781 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 DNM1P31-201ENST00000564149 696 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AC018552.3-201ENST00000567416 561 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms