Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 MIR4715-201ENST00000584117 79 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 AC005191.1-201ENST00000603950 358 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 AC244517.3-201ENST00000616254 1235 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 AC008785.1-201ENST00000624475 456 ntBASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS29Q9UBQ0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 RNU1-14P-201ENST00000362759 152 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC019155.1-201ENST00000382242 574 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 NCSTNP1-201ENST00000406229 144 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 RPL6P29-201ENST00000414863 865 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 RPS12P5-201ENST00000423449 371 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 GTF2IP2-201ENST00000424290 697 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 CNOT7P1-201ENST00000429006 852 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 RPS29P17-201ENST00000430795 166 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC243772.1-201ENST00000451620 410 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 Z95152.1-201ENST00000453556 656 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 RAD23BP3-201ENST00000454157 1152 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 RPL23AP24-201ENST00000458203 385 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 RPS20P4-201ENST00000461659 355 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 RNA5SP154-201ENST00000516193 111 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 UBTFL9-201ENST00000534504 1148 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC137768.1-201ENST00000549998 553 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC063950.1-201ENST00000552036 308 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC015849.6-201ENST00000605454 474 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC064801.1-201ENST00000612025 407 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC015922.4-201ENST00000612568 690 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC009237.17-201ENST00000618111 748 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AL445363.3-201ENST00000623080 671 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC067931.1-201ENST00000624190 671 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC138627.1-204ENST00000641894 765 ntBASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
VPS29Q9UBQ0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AL158163.1-201ENST00000603915 1649 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AC092162.3-201ENST00000624511 1624 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 RNA5SP447-201ENST00000363749 119 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 MIR513A2-201ENST00000385249 127 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 CYB5AP4-201ENST00000396692 399 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AL121834.1-202ENST00000404494 277 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 RNA5SP36-201ENST00000410197 133 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 RN7SKP235-201ENST00000410662 305 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 NRBF2P2-201ENST00000413087 861 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 MFSD13B-201ENST00000420133 1290 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 IPMKP1-201ENST00000425988 855 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 APOOP2-201ENST00000461561 539 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 RPL5P30-201ENST00000465511 891 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 MYL12AP1-201ENST00000518490 515 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AC068831.4-201ENST00000556118 109 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 FAM27D1-201ENST00000612308 341 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms