Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AC007012.2-201ENST00000623206 1676 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 AP003175.1-201ENST00000641383 6658 ntBASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUEDC1Q9NWM3 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RNU6-1017P-201ENST00000363613 106 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RN7SKP118-201ENST00000364331 330 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RN7SKP187-201ENST00000365536 330 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 SNORD116-29-201ENST00000384516 83 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AL590762.1-201ENST00000391782 432 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AL589647.1-201ENST00000402485 466 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 OR51A3P-201ENST00000413596 924 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AL596448.1-201ENST00000415024 392 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 DPPA2P2-201ENST00000418220 897 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RPL34P3-201ENST00000421454 338 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AL589872.1-201ENST00000426602 288 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 VN1R38P-201ENST00000450265 887 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RN7SL149P-201ENST00000465197 281 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AL161747.1-201ENST00000480068 358 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RPS10P20-201ENST00000494130 463 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 GAPDHP56-201ENST00000506031 988 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 PCBP2P3-201ENST00000509726 843 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RNA5SP401-201ENST00000515920 127 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RNU4-49P-201ENST00000516080 140 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 SCARNA18.2-201ENST00000516882 84 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RN7SKP233-201ENST00000517005 110 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RNU6-1314P-201ENST00000517139 104 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC104986.1-201ENST00000517978 436 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 OR5M6P-201ENST00000530227 937 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RN7SL66P-201ENST00000582099 264 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 POLR3GP2-201ENST00000588366 668 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC012603.1-201ENST00000606424 528 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AL022345.1-201ENST00000607292 135 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 BX323046.1-201ENST00000610145 535 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC245407.2-201ENST00000614199 451 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RN7SL126P-201ENST00000616400 299 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 MAPK10-261ENST00000641050 3109 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AP000866.6-201ENST00000638898 3579 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 DBF4P1-201ENST00000412976 1892 ntBASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CUEDC1Q9NWM3 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 AP002800.1-201ENST00000624982 2225 ntBASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CUEDC1Q9NWM3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms