Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 MIR921-201ENST00000401133 56 ntBASIC6.37□□□□□ -1.39
SCAPERQ9BY12 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 CEACAMP1-201ENST00000434624 1035 ntBASIC6.37□□□□□ -1.39
SCAPERQ9BY12 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 RPL7P22-201ENST00000466005 733 ntBASIC6.37□□□□□ -1.39
SCAPERQ9BY12 AC110768.1-201ENST00000509222 400 ntBASIC6.37□□□□□ -1.39
SCAPERQ9BY12 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 AL352979.3-201ENST00000553515 247 ntBASIC6.37□□□□□ -1.39
SCAPERQ9BY12 RPL23AP97-201ENST00000568955 471 ntBASIC6.37□□□□□ -1.39
SCAPERQ9BY12 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 SRGNP1-201ENST00000603392 451 ntBASIC6.37□□□□□ -1.39
SCAPERQ9BY12 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.37□□□□□ -1.39
SCAPERQ9BY12 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 AC010300.1-201ENST00000600671 5134 ntBASIC6.36□□□□□ -1.39
SCAPERQ9BY12 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 AL592291.1-201ENST00000403830 352 ntBASIC6.36□□□□□ -1.39
SCAPERQ9BY12 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 AC068533.1-201ENST00000418542 415 ntBASIC6.36□□□□□ -1.39
SCAPERQ9BY12 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 PDSS1P1-201ENST00000422953 1114 ntBASIC6.36□□□□□ -1.39
SCAPERQ9BY12 CYCSP43-201ENST00000438233 310 ntBASIC6.36□□□□□ -1.39
SCAPERQ9BY12 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 VN1R32P-201ENST00000452234 905 ntBASIC6.36□□□□□ -1.39
SCAPERQ9BY12 RPL7P15-201ENST00000461190 712 ntBASIC6.36□□□□□ -1.39
SCAPERQ9BY12 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 RNA5SP303-201ENST00000516192 130 ntBASIC6.36□□□□□ -1.39
SCAPERQ9BY12 AC027455.1-201ENST00000574104 594 ntBASIC6.36□□□□□ -1.39
SCAPERQ9BY12 AC016839.1-201ENST00000578162 867 ntBASIC6.36□□□□□ -1.39
SCAPERQ9BY12 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 AC022106.2-201ENST00000620114 757 ntBASIC6.36□□□□□ -1.39
SCAPERQ9BY12 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SCAPERQ9BY12 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 OR2AH1P-201ENST00000425717 928 ntBASIC6.35□□□□□ -1.39
SCAPERQ9BY12 RPL23AP46-201ENST00000438548 490 ntBASIC6.35□□□□□ -1.39
SCAPERQ9BY12 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 AC110792.1-201ENST00000491826 472 ntBASIC6.35□□□□□ -1.39
SCAPERQ9BY12 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 AC005034.4-201ENST00000603612 899 ntBASIC6.35□□□□□ -1.39
SCAPERQ9BY12 IMMP1LP1-201ENST00000605170 488 ntBASIC6.35□□□□□ -1.39
SCAPERQ9BY12 AC096577.2-201ENST00000611455 153 ntBASIC6.35□□□□□ -1.39
SCAPERQ9BY12 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SCAPERQ9BY12 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 U8.11-201ENST00000384699 133 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 U8.12-201ENST00000384701 133 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 EIF1P3-201ENST00000423841 334 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 TBCAP1-201ENST00000436520 327 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 NANOGP10-201ENST00000453325 895 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 U8.18-201ENST00000459285 133 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 AL591473.1-201ENST00000464297 313 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 AC104164.2-201ENST00000496953 495 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 AC138938.1-201ENST00000515431 782 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 AC091905.2-201ENST00000623143 306 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 AC116667.1-201ENST00000604855 2072 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 MUC2-202ENST00000613187 4845 ntBASIC6.34□□□□□ -1.39
SCAPERQ9BY12 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SCAPERQ9BY12 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.33□□□□□ -1.4
SCAPERQ9BY12 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.33□□□□□ -1.4
SCAPERQ9BY12 RPS3AP12-201ENST00000443616 753 ntBASIC6.33□□□□□ -1.4
SCAPERQ9BY12 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.33□□□□□ -1.4
SCAPERQ9BY12 RPS4XP15-201ENST00000489210 795 ntBASIC6.33□□□□□ -1.4
SCAPERQ9BY12 HPRT1P2-201ENST00000505250 544 ntBASIC6.33□□□□□ -1.4
SCAPERQ9BY12 AL592436.1-201ENST00000605135 558 ntBASIC6.33□□□□□ -1.4
SCAPERQ9BY12 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms