Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MRPL35P2-201ENST00000448009 511 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC092647.2-201ENST00000452998 253 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC090114.3-201ENST00000479267 829 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 HMGB1P23-201ENST00000518743 568 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC135001.1-201ENST00000544546 283 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 AP001180.3-201ENST00000582221 145 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 RN7SL52P-201ENST00000584271 284 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC087763.1-201ENST00000603391 286 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AL021707.7-201ENST00000607991 416 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC023509.5-201ENST00000617434 807 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.8□□□□□ -1.64
VMP1Q96GC9 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC068870.2-201ENST00000620635 389 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 AL163152.1-201ENST00000642001 374 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VMP1Q96GC9 AC119744.1-201ENST00000454746 1715 ntBASIC4.8□□□□□ -1.64
VMP1Q96GC9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VMP1Q96GC9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VMP1Q96GC9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 SNURFL-201ENST00000309296 343 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 RN7SKP113-201ENST00000363891 295 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 U3.15-201ENST00000365398 212 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AL645927.1-201ENST00000396783 406 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC093162.1-201ENST00000419682 124 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC092905.1-201ENST00000467527 949 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 RN7SL329P-201ENST00000467740 299 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 BX284632.1-201ENST00000478218 541 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC097173.1-201ENST00000505862 819 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC090071.1-201ENST00000507713 644 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 TCP11X3P-202ENST00000514289 1254 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC008494.2-201ENST00000514544 370 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC026688.1-201ENST00000520639 1168 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AL352979.3-201ENST00000553515 247 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC027104.1-201ENST00000563702 681 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC125494.3-201ENST00000602759 455 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 AL139286.1-201ENST00000604465 483 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC018695.5-201ENST00000605872 315 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 AP003117.2-201ENST00000606010 545 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 AC097505.1-201ENST00000610199 565 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.79□□□□□ -1.64
VMP1Q96GC9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VMP1Q96GC9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.79□□□□□ -1.64
VMP1Q96GC9 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.78□□□□□ -1.64
VMP1Q96GC9 MTCO1P14-201ENST00000441695 1559 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.78□□□□□ -1.64
VMP1Q96GC9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VMP1Q96GC9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VMP1Q96GC9 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VMP1Q96GC9 MIR124-3-201ENST00000384866 87 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.78□□□□□ -1.64
VMP1Q96GC9 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 AC004448.2-201ENST00000422360 586 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.78□□□□□ -1.64
VMP1Q96GC9 ELOCP6-201ENST00000429066 328 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 RPL37P1-201ENST00000432310 284 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 AC092647.3-201ENST00000443044 633 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.78□□□□□ -1.64
VMP1Q96GC9 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VMP1Q96GC9 KNOP1P3-201ENST00000446933 426 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 BX842559.2-201ENST00000451418 605 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 ELOCP12-201ENST00000458706 328 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 AC018635.1-201ENST00000468292 1030 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.78□□□□□ -1.64
VMP1Q96GC9 AP000926.1-201ENST00000479573 241 ntBASIC4.78□□□□□ -1.64
VMP1Q96GC9 AC004453.1-201ENST00000487895 408 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms