Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SNORA51.12-201ENST00000384448 134 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 HNRNPDP2-201ENST00000406475 478 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AP001324.1-201ENST00000428553 399 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AC092170.1-201ENST00000440211 356 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AC092647.2-201ENST00000452998 253 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 RWDD4P1-201ENST00000488019 565 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AC098799.3-201ENST00000506095 438 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 HMGN1P15-201ENST00000513870 295 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AP005119.2-201ENST00000579735 1105 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AC095055.1-201ENST00000603472 1113 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AC087783.2-201ENST00000605070 562 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 BNIP3P19-201ENST00000605397 577 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AP005229.2-201ENST00000609980 697 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AL445528.2-201ENST00000620582 470 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 AC092608.3-201ENST00000625017 386 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 MAPK10-303ENST00000641324 3959 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 MAPK10-286ENST00000641208 8747 ntBASIC4.68□□□□□ -1.66
VPS33AQ96AX1 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS33AQ96AX1 Z73965.1-201ENST00000623412 2297 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 OR52B1P-201ENST00000316506 909 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 IL6STP1-201ENST00000346911 1020 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 SNORA17.1-201ENST00000362945 126 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 RNU6-354P-201ENST00000383862 107 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 RNU6-610P-201ENST00000384264 107 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 SNORA66-201ENST00000384792 133 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AL357515.1-201ENST00000402967 542 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC004022.2-201ENST00000413824 193 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 CFL1P1-202ENST00000432948 411 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC006994.1-201ENST00000438212 839 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC245047.2-201ENST00000441060 530 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AL096829.2-201ENST00000446582 742 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AL096803.2-201ENST00000450032 677 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 RPL7AP28-201ENST00000464513 571 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 RPS21P4-201ENST00000487122 248 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC108693.1-201ENST00000496068 432 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC090568.1-201ENST00000509499 856 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AL049779.2-201ENST00000553847 315 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC090888.3-201ENST00000558917 509 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AL392112.1-201ENST00000605115 829 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC005377.1-201ENST00000605126 456 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC012414.7-202ENST00000622705 1090 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AP002371.2-201ENST00000624450 503 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 BMS1P21-201ENST00000634565 365 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AL590396.2-201ENST00000636511 1041 ntBASIC4.67□□□□□ -1.66
VPS33AQ96AX1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VPS33AQ96AX1 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 MTCO1P6-201ENST00000481192 1384 ntBASIC4.66□□□□□ -1.66
VPS33AQ96AX1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS33AQ96AX1 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms