Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL450992.3-201ENST00000413192 568 ntBASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 OR4K6P-201ENST00000416478 897 ntBASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 NPM1P34-201ENST00000428821 893 ntBASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 AC091286.1-201ENST00000431233 461 ntBASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 RPL12P46-201ENST00000436610 195 ntBASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 AC069304.1-201ENST00000491593 704 ntBASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 AC140113.4-201ENST00000622087 222 ntBASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 AC104260.2-201ENST00000623551 3497 ntBASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC168Q8NDH2 RNU11-4P-201ENST00000391149 133 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 DNAJA1P3-201ENST00000399417 1194 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 COX5BP7-201ENST00000414780 274 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AC104306.1-201ENST00000449702 371 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AC110792.1-201ENST00000491826 472 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AL358832.1-201ENST00000497800 389 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AC016559.2-201ENST00000510759 359 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AC097486.1-201ENST00000515331 210 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 HSPE1P5-201ENST00000561489 272 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AL031985.2-201ENST00000600955 480 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AC015804.1-201ENST00000622935 435 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AL603750.1-201ENST00000624216 1717 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AC112206.1-201ENST00000468416 477 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AC005972.3-201ENST00000606304 481 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 AL117378.2-201ENST00000622916 1337 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 ADAM24P-201ENST00000398655 2101 ntBASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC168Q8NDH2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 OR8F1P-201ENST00000425243 930 ntBASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 MTND6P6-201ENST00000478031 263 ntBASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 RNU1-95P-201ENST00000516357 160 ntBASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 RNU1-128P-201ENST00000516704 160 ntBASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 ELOCP35-201ENST00000604289 336 ntBASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 AC023632.6-201ENST00000624338 2177 ntBASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 HSPD1P15-201ENST00000505573 1122 ntBASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 DUX4L52-201ENST00000549363 777 ntBASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 AL442067.2-201ENST00000614033 363 ntBASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 AC026367.3-201ENST00000619032 590 ntBASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC168Q8NDH2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms